RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 CNTNAP2Q9UHC6 1331 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 TLL1O43897 1013 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 PRKCBP05771 671 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 CA3P07451 260 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 LINC00271P0C7V0 271 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 ZSCAN20P17040 1043 aaPredicted RBP18.1■□□□□ 0.49
RNF43-206ENST00000582293 CASP1P29466 404 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 GATMP50440 423 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 DMP1Q13316 513 aaPredicted RBP18.1■□□□□ 0.49
RNF43-206ENST00000582293 TPRNQ4KMQ1 711 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 NT5DC1Q5TFE4 455 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 GRAMD1CQ8IYS0 662 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 FSIP1Q8NA03 581 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 TIFAQ96CG3 184 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 PRIMPOLQ96LW4 560 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 RAD9AQ99638 391 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 EIF2AQ9BY44 585 aaKnown RBP18.1■□□□□ 0.49
RNF43-206ENST00000582293 TRIM9Q9C026 710 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 TMEM134Q9H6X4 195 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 ELAC1Q9H777 363 aaKnown RBP18.1■□□□□ 0.49
RNF43-206ENST00000582293 KMT5AQ9NQR1 393 aa18.1■□□□□ 0.49
RNF43-206ENST00000582293 A0A1B0GUA9 196 aa18.09■□□□□ 0.49
RNF43-206ENST00000582293 MEIS3P2A8K0S8 358 aa18.09■□□□□ 0.49
RNF43-206ENST00000582293 ACKR2O00590 384 aa18.09■□□□□ 0.49
RNF43-206ENST00000582293 ERLIN2O94905 339 aa18.09■□□□□ 0.49
RNF43-206ENST00000582293 FAM13AO94988 1023 aa18.09■□□□□ 0.49
RNF43-206ENST00000582293 KRT18P05783 430 aaKnown RBP18.09■□□□□ 0.49
RNF43-206ENST00000582293 MAPTP10636 758 aaKnown RBP18.09■□□□□ 0.49
RNF43-206ENST00000582293 AXLP30530 894 aa18.09■□□□□ 0.49
RNF43-206ENST00000582293 RAB30Q15771 203 aa18.09■□□□□ 0.49
RNF43-206ENST00000582293 TWF2Q6IBS0 349 aaKnown RBP18.09■□□□□ 0.49
RNF43-206ENST00000582293 CNNM4Q6P4Q7 775 aa18.09■□□□□ 0.49
RNF43-206ENST00000582293 SMG8Q8ND04 991 aaKnown RBP18.09■□□□□ 0.49
RNF43-206ENST00000582293 MRPS27Q92552 414 aaKnown RBP18.09■□□□□ 0.49
RNF43-206ENST00000582293 PARVGQ9HBI0 331 aa18.09■□□□□ 0.49
RNF43-206ENST00000582293 FAM105AQ9NUU6 356 aa18.09■□□□□ 0.49
RNF43-206ENST00000582293 TMEM161AQ9NX61 479 aa18.09■□□□□ 0.49
RNF43-206ENST00000582293 DACT1Q9NYF0 836 aa18.09■□□□□ 0.49
RNF43-206ENST00000582293 LARSQ9P2J5 1176 aaKnown RBP18.09■□□□□ 0.49
RNF43-206ENST00000582293 FNDC1Q4ZHG4 1894 aaPredicted RBP18.08■□□□□ 0.49
RNF43-206ENST00000582293 K7ERI5 159 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 ZNF623O75123 536 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 GADD45BO75293 160 aaPredicted RBP18.08■□□□□ 0.48
RNF43-206ENST00000582293 SLFN14P0C7P3 912 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 FGFR1P11362 822 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 LIG1P18858 919 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 IBSPP21815 317 aaPredicted RBP18.08■□□□□ 0.48
RNF43-206ENST00000582293 NMT1P30419 496 aaKnown RBP18.08■□□□□ 0.48
RNF43-206ENST00000582293 EFNA5P52803 228 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 TAP1Q03518 808 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 MAPK6Q16659 721 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 CLLU1OSQ5K130 101 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 EEF1DP3Q658K8 133 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 Q7L0L9 218 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 SFR1Q86XK3 245 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 MYCT1Q8N699 235 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 C7orf25Q9BPX7 421 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 ZBED2Q9BTP6 218 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 STRA6Q9BX79 667 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 FGFBP2Q9BYJ0 223 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 PDZD7Q9H5P4 517 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 MSRAQ9UJ68 235 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 INSL6Q9Y581 213 aa18.08■□□□□ 0.48
RNF43-206ENST00000582293 CHD7Q9P2D1 2997 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 LINC01553A4QN01 128 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 ABLIM1O14639 778 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 TRAK2O60296 914 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 TBCAO75347 108 aaKnown RBP18.07■□□□□ 0.48
RNF43-206ENST00000582293 SYKP43405 635 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 PRPF4BQ13523 1007 aaKnown RBP18.07■□□□□ 0.48
RNF43-206ENST00000582293 GPR153Q6NV75 609 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 NOTUMQ6P988 496 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 HAUS6Q7Z4H7 955 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 MRPL10Q7Z7H8 261 aaKnown RBP18.07■□□□□ 0.48
RNF43-206ENST00000582293 FMR1NBQ8N0W7 255 aaPredicted RBP18.07■□□□□ 0.48
RNF43-206ENST00000582293 TMEM87AQ8NBN3 555 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 ENGASEQ8NFI3 743 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 LPPQ93052 612 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 PAGE5Q96GU1 130 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 BLZF1Q9H2G9 400 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 ZHX3Q9H4I2 956 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 MAGEF1Q9HAY2 307 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 PTPRHQ9HD43 1115 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 PCDHB2Q9Y5E7 798 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 CDH23Q9H251 3354 aa18.07■□□□□ 0.48
RNF43-206ENST00000582293 PPP1R37O75864 691 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 STAG3L1P0CL83 205 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 AFMP43652 599 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 EHHADHQ08426 723 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 SNW1Q13573 536 aaKnown RBP18.06■□□□□ 0.48
RNF43-206ENST00000582293 CUL4BQ13620 913 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 SLC27A1Q6PCB7 646 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 AGMOQ6ZNB7 445 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 HPS3Q969F9 1004 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 CCDC51Q96ER9 411 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 CASD1Q96PB1 797 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 YME1L1Q96TA2 773 aa18.06■□□□□ 0.48
RNF43-206ENST00000582293 ACO2Q99798 780 aaKnown RBP18.06■□□□□ 0.48
RNF43-206ENST00000582293 PYM1Q9BRP8 204 aaKnown RBP18.06■□□□□ 0.48
RNF43-206ENST00000582293 TARS2Q9BW92 718 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms