RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 LINC01465Q8N7H1 131 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 CTCFLQ8NI51 663 aaPredicted RBP7.07□□□□□ -1.28
TVP23B-210ENST00000582288 NETO1Q8TDF5 533 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 RSAD2Q8WXG1 361 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 AUTS2Q8WXX7 1259 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 RILPL2Q969X0 211 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 FAM167AQ96KS9 214 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 MAP7D2Q96T17 732 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 TMEM175Q9BSA9 504 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 OSBPL3Q9H4L5 887 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 PLEKHA4Q9H4M7 779 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 ZNF302Q9NR11 478 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 DIAPH3Q9NSV4 1193 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 SPATA6Q9NWH7 488 aaPredicted RBP7.07□□□□□ -1.28
TVP23B-210ENST00000582288 ZDHHC7Q9NXF8 308 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 PKD2L1Q9P0L9 805 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 SMG5Q9UPR3 1016 aaKnown RBP7.07□□□□□ -1.28
TVP23B-210ENST00000582288 PCDHGA10Q9Y5H3 936 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 ACACBO00763 2458 aa7.07□□□□□ -1.28
TVP23B-210ENST00000582288 DCDC2BA2VCK2 349 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 FAM187AA6NFU0 413 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 NCAM2O15394 837 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 CCNE2O96020 404 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 ALDH2P05091 517 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 DARSP14868 501 aaKnown RBP7.06□□□□□ -1.28
TVP23B-210ENST00000582288 ATP4AP20648 1035 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 RAB27AP51159 221 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 NLRP11P59045 1033 aaKnown RBP7.06□□□□□ -1.28
TVP23B-210ENST00000582288 PFKPQ01813 784 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 ACAP1Q15027 740 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 NOMO2Q5JPE7 1267 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 PPM1JQ5JR12 505 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 CCDC60Q8IWA6 550 aaPredicted RBP7.06□□□□□ -1.28
TVP23B-210ENST00000582288 SMAP1Q8IYB5 467 aaPredicted RBP7.06□□□□□ -1.28
TVP23B-210ENST00000582288 TMTC2Q8N394 836 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 METTL13Q8N6R0 699 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 RNF169Q8NCN4 708 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 CLDN23Q96B33 292 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 RPS6KC1Q96S38 1066 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 MYADMQ96S97 322 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 IER2Q9BTL4 223 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 VN1R3Q9BXE9 311 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 NRDE2Q9H7Z3 1164 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 LY9Q9HBG7 655 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 RXFP1Q9HBX9 757 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 MAN1C1Q9NR34 630 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 TBC1D22BQ9NU19 505 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 TBC1D13Q9NVG8 400 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 KANSL3Q9P2N6 904 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 GMEB2Q9UKD1 530 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 PATJQ8NI35 1801 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 C2orf16Q68DN1 1984 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 CEP250Q9BV73 2442 aa7.06□□□□□ -1.28
TVP23B-210ENST00000582288 INPPL1O15357 1258 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 DHX15O43143 795 aaKnown RBP7.05□□□□□ -1.28
TVP23B-210ENST00000582288 OFD1O75665 1012 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 EFEMP2O95967 443 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 GLUD1P00367 558 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 SOD2P04179 222 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 URODP06132 367 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 CALM1P0DP23 149 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 CALM2P0DP24 149 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 CALM3P0DP25 149 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 GPC3P51654 580 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 NRLP54845 237 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 RNASELQ05823 741 aaKnown RBP7.05□□□□□ -1.28
TVP23B-210ENST00000582288 DMWDQ09019 674 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 AP3B2Q13367 1082 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 HDAC1Q13547 482 aaPredicted RBP7.05□□□□□ -1.28
TVP23B-210ENST00000582288 ZBTB41Q5SVQ8 909 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 LAIR1Q6GTX8 287 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 ZNF746Q6NUN9 644 aaPredicted RBP7.05□□□□□ -1.28
TVP23B-210ENST00000582288 SWSAP1Q6NVH7 229 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 EFCAB12Q6NXP0 572 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 MTSS1LQ765P7 747 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 RALYLQ86SE5 291 aaKnown RBP7.05□□□□□ -1.28
TVP23B-210ENST00000582288 RNF168Q8IYW5 571 aaPredicted RBP7.05□□□□□ -1.28
TVP23B-210ENST00000582288 CELF5Q8N6W0 485 aaKnown RBP7.05□□□□□ -1.28
TVP23B-210ENST00000582288 NCOA7Q8NI08 942 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 FEZF2Q8TBJ5 459 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 IGDCC4Q8TDY8 1250 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 BCL7CQ8WUZ0 217 aaPredicted RBP7.05□□□□□ -1.28
TVP23B-210ENST00000582288 SMG7Q92540 1137 aaKnown RBP7.05□□□□□ -1.28
TVP23B-210ENST00000582288 ZNF516Q92618 1163 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 PHKBQ93100 1093 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 ZNF707Q96C28 371 aaPredicted RBP7.05□□□□□ -1.28
TVP23B-210ENST00000582288 PGBD4Q96DM1 585 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 FOXQ1Q9C009 403 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 INO80BQ9C086 356 aaPredicted RBP7.05□□□□□ -1.28
TVP23B-210ENST00000582288 NT5C3AQ9H0P0 336 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 GLT8D2Q9H1C3 349 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 SENP2Q9HC62 589 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 PRMT8Q9NR22 394 aaPredicted RBP7.05□□□□□ -1.28
TVP23B-210ENST00000582288 ANGPTL2Q9UKU9 493 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 USP18Q9UMW8 372 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 NUMBLQ9Y6R0 609 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 SPEGQ15772 3267 aa7.05□□□□□ -1.28
TVP23B-210ENST00000582288 CNTNAP2Q9UHC6 1331 aa7.04□□□□□ -1.28
TVP23B-210ENST00000582288 USP24Q9UPU5 2620 aa7.04□□□□□ -1.28
TVP23B-210ENST00000582288 FAM170BA6NMN3 283 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms