RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 GIMAP6Q6P9H5 292 aa6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 ARHGEF19Q8IW93 802 aa6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 OR52N2Q8NGI0 321 aa6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 CLUHP3Q96NS8 147 aa6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 RSAD1Q9HA92 442 aa6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 NCOA5Q9HCD5 579 aaKnown RBP6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 TMEM260Q9NX78 707 aa6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 INSL6Q9Y581 213 aa6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 EPN1Q9Y6I3 576 aaPredicted RBP6.52□□□□□ -1.37
SMCHD1-207ENST00000581711 TCRBV16S1A1N1A0A5B0 115 aa6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 DVL2O14641 736 aa6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 ASMTLO95671 621 aa6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 APOBEC3AP31941 199 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 AVPR1BP47901 424 aa6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 VPS72Q15906 364 aa6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 C21orf62-AS1Q17RA5 79 aa6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 PRR16Q569H4 304 aa6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 ZC3H12BQ5HYM0 836 aaKnown RBP6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 FGD2Q7Z6J4 655 aa6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 LILRA3Q8N6C8 439 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 RPGRQ92834 1020 aaKnown RBP6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 TUBGCP5Q96RT8 1024 aa6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 PDCD2LQ9BRP1 358 aa6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 NDC1Q9BTX1 674 aa6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 ENKD1Q9H0I2 346 aa6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.51□□□□□ -1.37
SMCHD1-207ENST00000581711 COL11A2P13942 1736 aaPredicted RBP6.5□□□□□ -1.37
SMCHD1-207ENST00000581711 ZNF185O15231 689 aa6.5□□□□□ -1.37
SMCHD1-207ENST00000581711 CFBP00751 764 aa6.5□□□□□ -1.37
SMCHD1-207ENST00000581711 MYBPC3Q14896 1274 aa6.5□□□□□ -1.37
SMCHD1-207ENST00000581711 CMTR2Q8IYT2 770 aaKnown RBP6.5□□□□□ -1.37
SMCHD1-207ENST00000581711 GLB1L3Q8NCI6 653 aaPredicted RBP6.5□□□□□ -1.37
SMCHD1-207ENST00000581711 PITHD1Q9GZP4 211 aaPredicted RBP6.5□□□□□ -1.37
SMCHD1-207ENST00000581711 EPC1Q9H2F5 836 aa6.5□□□□□ -1.37
SMCHD1-207ENST00000581711 AKIP1Q9NQ31 210 aa6.5□□□□□ -1.37
SMCHD1-207ENST00000581711 ACSS2Q9NR19 701 aa6.5□□□□□ -1.37
SMCHD1-207ENST00000581711 FANCLQ9NW38 375 aa6.5□□□□□ -1.37
SMCHD1-207ENST00000581711 TRPM5Q9NZQ8 1165 aa6.5□□□□□ -1.37
SMCHD1-207ENST00000581711 SYNPO2Q9UMS6 1093 aa6.5□□□□□ -1.37
SMCHD1-207ENST00000581711 NRP1O14786 923 aa6.49□□□□□ -1.37
SMCHD1-207ENST00000581711 DNAJC6O75061 913 aa6.49□□□□□ -1.37
SMCHD1-207ENST00000581711 NCR1O76036 304 aa6.49□□□□□ -1.37
SMCHD1-207ENST00000581711 PTH2RP49190 550 aa6.49□□□□□ -1.37
SMCHD1-207ENST00000581711 MECP2P51608 486 aaKnown RBP6.49□□□□□ -1.37
SMCHD1-207ENST00000581711 ARHGAP44Q17R89 818 aa6.49□□□□□ -1.37
SMCHD1-207ENST00000581711 TKFCQ3LXA3 575 aa6.49□□□□□ -1.37
SMCHD1-207ENST00000581711 GDF7Q7Z4P5 450 aa6.49□□□□□ -1.37
SMCHD1-207ENST00000581711 BRAPQ7Z569 592 aa6.49□□□□□ -1.37
SMCHD1-207ENST00000581711 LINC00476Q8WZB0 136 aa6.49□□□□□ -1.37
SMCHD1-207ENST00000581711 COQ10AQ96MF6 247 aa6.49□□□□□ -1.37
SMCHD1-207ENST00000581711 UIMC1Q96RL1 719 aa6.49□□□□□ -1.37
SMCHD1-207ENST00000581711 OSBPL6Q9BZF3 934 aa6.49□□□□□ -1.37
SMCHD1-207ENST00000581711 ING3Q9NXR8 418 aa6.49□□□□□ -1.37
SMCHD1-207ENST00000581711 RNASET2O00584 256 aaKnown RBP6.48□□□□□ -1.37
SMCHD1-207ENST00000581711 SEC24CP53992 1094 aa6.48□□□□□ -1.37
SMCHD1-207ENST00000581711 ERCC6LQ2NKX8 1250 aa6.48□□□□□ -1.37
SMCHD1-207ENST00000581711 ZNF362Q5T0B9 420 aaPredicted RBP6.48□□□□□ -1.37
SMCHD1-207ENST00000581711 FAM83AQ86UY5 434 aa6.48□□□□□ -1.37
SMCHD1-207ENST00000581711 NELL1Q92832 810 aa6.48□□□□□ -1.37
SMCHD1-207ENST00000581711 CAVIN3Q969G5 261 aa6.48□□□□□ -1.37
SMCHD1-207ENST00000581711 LSM14BQ9BX40 385 aaKnown RBP6.48□□□□□ -1.37
SMCHD1-207ENST00000581711 PCIF1Q9H4Z3 704 aa6.48□□□□□ -1.37
SMCHD1-207ENST00000581711 TRIM39Q9HCM9 518 aa6.48□□□□□ -1.37
SMCHD1-207ENST00000581711 TBX22Q9Y458 520 aa6.48□□□□□ -1.37
SMCHD1-207ENST00000581711 ARHGEF17Q96PE2 2063 aaPredicted RBP6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 A0A0A6YYJ9 748 aa6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 CCDC163A0A0D9SF12 145 aa6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 GAGE12BA1L429 117 aa6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 GAGE12HA6NDE8 117 aa6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 PLD2O14939 933 aa6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 FSBPO95073 299 aa6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 NDUFA10O95299 355 aa6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 FOXI1Q12951 378 aa6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 MAN2A1Q16706 1144 aa6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 NOP9Q86U38 636 aaKnown RBP6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 FAM98AQ8NCA5 519 aaKnown RBP6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 DCLRE1CQ96SD1 692 aaKnown RBP6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 SOX7Q9BT81 388 aa6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 MRPL4Q9BYD3 311 aaKnown RBP6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 MTG2Q9H4K7 406 aa6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 DKK2Q9UBU2 259 aa6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 CHST2Q9Y4C5 530 aa6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 CD2APQ9Y5K6 639 aa6.47□□□□□ -1.37
SMCHD1-207ENST00000581711 CYP17A1P05093 508 aa6.46□□□□□ -1.38
SMCHD1-207ENST00000581711 GAAP10253 952 aa6.46□□□□□ -1.38
SMCHD1-207ENST00000581711 SDSP20132 328 aa6.46□□□□□ -1.38
SMCHD1-207ENST00000581711 EPHA7Q15375 998 aa6.46□□□□□ -1.38
SMCHD1-207ENST00000581711 BEAN1Q3B7T3 259 aa6.46□□□□□ -1.38
SMCHD1-207ENST00000581711 KANSL1Q7Z3B3 1105 aa6.46□□□□□ -1.38
SMCHD1-207ENST00000581711 NME9Q86XW9 330 aa6.46□□□□□ -1.38
SMCHD1-207ENST00000581711 HOMER1Q86YM7 354 aa6.46□□□□□ -1.38
SMCHD1-207ENST00000581711 BOLLQ8N9W6 283 aaKnown RBP6.46□□□□□ -1.38
SMCHD1-207ENST00000581711 SIMC1Q8NDZ2 872 aa6.46□□□□□ -1.38
SMCHD1-207ENST00000581711 APPBP2Q92624 585 aa6.46□□□□□ -1.38
SMCHD1-207ENST00000581711 FRMD4BQ9Y2L6 1034 aa6.46□□□□□ -1.38
SMCHD1-207ENST00000581711 TNPO3Q9Y5L0 923 aaKnown RBP6.46□□□□□ -1.38
SMCHD1-207ENST00000581711 M0R2C6 588 aa6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 LEFTY2O00292 366 aa6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 KCNQ2O43526 872 aa6.45□□□□□ -1.38
SMCHD1-207ENST00000581711 CDC45O75419 566 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms