RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 PIDD1Q9HB75 910 aa14.33□□□□□ -0.12
SS18-219ENST00000581570 C6orf50Q9HD87 102 aa14.33□□□□□ -0.12
SS18-219ENST00000581570 SUCLA2Q9P2R7 463 aaPredicted RBP14.33□□□□□ -0.12
SS18-219ENST00000581570 SEPT9Q9UHD8 586 aaPredicted RBP14.33□□□□□ -0.12
SS18-219ENST00000581570 BRPF3Q9ULD4 1205 aa14.33□□□□□ -0.12
SS18-219ENST00000581570 PCDHB2Q9Y5E7 798 aa14.33□□□□□ -0.12
SS18-219ENST00000581570 DMXL1Q9Y485 3027 aa14.33□□□□□ -0.12
SS18-219ENST00000581570 IGKV6-21A0A0C4DH24 114 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 ESYT2A0FGR8 921 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 POTEMA6NI47 508 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 GOLGA8AA7E2F4 631 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 GOLGA8BA8MQT2 603 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 MSH4O15457 936 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 TEX28O15482 410 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 GAS7O60861 476 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 LAMP2P13473 410 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 GLULP15104 373 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 SFNP31947 248 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 AFF1P51825 1210 aaKnown RBP14.32□□□□□ -0.12
SS18-219ENST00000581570 JAK3P52333 1124 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 PFKFB3Q16875 520 aaPredicted RBP14.32□□□□□ -0.12
SS18-219ENST00000581570 XKR3Q5GH77 459 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 POTEGQ6S5H5 508 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 RIT2Q99578 217 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 TEKT3Q9BXF9 490 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 FOXQ1Q9C009 403 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 UNC45AQ9H3U1 944 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 RSAD1Q9HA92 442 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 SLC2A4RGQ9NR83 387 aa14.32□□□□□ -0.12
SS18-219ENST00000581570 FAM217BQ9NTX9 383 aaPredicted RBP14.32□□□□□ -0.12
SS18-219ENST00000581570 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.32□□□□□ -0.12
SS18-219ENST00000581570 ANHXE9PGG2 379 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 POMCP01189 267 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 SPATA31D3P0C874 917 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 CDC27P30260 824 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 VARS2Q5ST30 1063 aaKnown RBP14.31□□□□□ -0.12
SS18-219ENST00000581570 KIAA0319Q5VV43 1072 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 SPATA31D4Q6ZUB0 917 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 GET4Q7L5D6 327 aaPredicted RBP14.31□□□□□ -0.12
SS18-219ENST00000581570 MRPL10Q7Z7H8 261 aaKnown RBP14.31□□□□□ -0.12
SS18-219ENST00000581570 KSR1Q8IVT5 923 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 MAML2Q8IZL2 1156 aaPredicted RBP14.31□□□□□ -0.12
SS18-219ENST00000581570 PJA1Q8NG27 643 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 CCDC12Q8WUD4 166 aaPredicted RBP14.31□□□□□ -0.12
SS18-219ENST00000581570 HDAC7Q8WUI4 952 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 ZNF707Q96C28 371 aaPredicted RBP14.31□□□□□ -0.12
SS18-219ENST00000581570 BORCS6Q96GS4 357 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 SHDQ96IW2 340 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 NLRP4Q96MN2 994 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 TCEANC2Q96MN5 208 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 CEP89Q96ST8 783 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 SH2D3AQ9BRG2 576 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 RXFP1Q9HBX9 757 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 NCDNQ9UBB6 729 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 PRG3Q9Y2Y8 225 aaPredicted RBP14.31□□□□□ -0.12
SS18-219ENST00000581570 CNTNAP2Q9UHC6 1331 aa14.31□□□□□ -0.12
SS18-219ENST00000581570 TMEM150BA6NC51 233 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 GAS2O43903 313 aaKnown RBP14.3□□□□□ -0.12
SS18-219ENST00000581570 LRRN2O75325 713 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 MAFO75444 373 aaPredicted RBP14.3□□□□□ -0.12
SS18-219ENST00000581570 STBD1O95210 358 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 SDHBP21912 280 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 GNA11P29992 359 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 OR1G1P47890 313 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 GLUD2P49448 558 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 STARD6P59095 220 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 EXOSC10Q01780 885 aaKnown RBP14.3□□□□□ -0.12
SS18-219ENST00000581570 HTR4Q13639 388 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 LRCH2Q5VUJ6 765 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 MIER3Q7Z3K6 550 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 PALB2Q86YC2 1186 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 ST13P5Q8NFI4 369 aaPredicted RBP14.3□□□□□ -0.12
SS18-219ENST00000581570 SLC5A5Q92911 643 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 CCDC136Q96JN2 1154 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 NT5C3AQ9H0P0 336 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 PLEKHA4Q9H4M7 779 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 AGPAT5Q9NUQ2 364 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 MARCH5Q9NX47 278 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 NUMBLQ9Y6R0 609 aa14.3□□□□□ -0.12
SS18-219ENST00000581570 MYH9P35579 1960 aaKnown RBP14.3□□□□□ -0.12
SS18-219ENST00000581570 DNAH14Q0VDD8 3507 aa14.29□□□□□ -0.12
SS18-219ENST00000581570 ZNF292O60281 2723 aa14.29□□□□□ -0.12
SS18-219ENST00000581570 KLF18A0A0U1RQI7 1052 aa14.29□□□□□ -0.12
SS18-219ENST00000581570 DDX11L8A8MPP1 907 aa14.29□□□□□ -0.12
SS18-219ENST00000581570 PAPLNO95428 1278 aa14.29□□□□□ -0.12
SS18-219ENST00000581570 ADD1P35611 737 aaKnown RBP14.29□□□□□ -0.12
SS18-219ENST00000581570 ATXN1P54253 815 aaKnown RBP14.29□□□□□ -0.12
SS18-219ENST00000581570 DSG1Q02413 1049 aa14.29□□□□□ -0.12
SS18-219ENST00000581570 ZNF528Q3MIS6 628 aa14.29□□□□□ -0.12
SS18-219ENST00000581570 DHX32Q7L7V1 743 aaKnown RBP14.29□□□□□ -0.12
SS18-219ENST00000581570 COLGALT2Q8IYK4 626 aa14.29□□□□□ -0.12
SS18-219ENST00000581570 GPR161Q8N6U8 529 aaKnown RBP14.29□□□□□ -0.12
SS18-219ENST00000581570 RDM1Q8NG50 284 aa14.29□□□□□ -0.12
SS18-219ENST00000581570 PHKBQ93100 1093 aa14.29□□□□□ -0.12
SS18-219ENST00000581570 GJA10Q969M2 543 aa14.29□□□□□ -0.12
SS18-219ENST00000581570 JPH2Q9BR39 696 aaPredicted RBP14.29□□□□□ -0.12
SS18-219ENST00000581570 BCO2Q9BYV7 579 aa14.29□□□□□ -0.12
SS18-219ENST00000581570 PRKD2Q9BZL6 878 aa14.29□□□□□ -0.12
SS18-219ENST00000581570 IFT122Q9HBG6 1241 aa14.29□□□□□ -0.12
SS18-219ENST00000581570 SPATA6Q9NWH7 488 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms