RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 ANP32AP39687 249 aaKnown RBP21.74■■□□□ 1.07
LIMD2-209ENST00000580222 SLC11A1P49279 550 aa21.74■■□□□ 1.07
LIMD2-209ENST00000580222 GPR152Q8TDT2 470 aa21.74■■□□□ 1.07
LIMD2-209ENST00000580222 MRPL9Q9BYD2 267 aaKnown RBP21.74■■□□□ 1.07
LIMD2-209ENST00000580222 TBC1D13Q9NVG8 400 aa21.74■■□□□ 1.07
LIMD2-209ENST00000580222 KIF3AQ9Y496 699 aa21.74■■□□□ 1.07
LIMD2-209ENST00000580222 CACNA1GO43497 2377 aa21.74■■□□□ 1.07
LIMD2-209ENST00000580222 CHD8Q9HCK8 2581 aa21.73■■□□□ 1.07
LIMD2-209ENST00000580222 ADAMTS3O15072 1205 aa21.73■■□□□ 1.07
LIMD2-209ENST00000580222 KLRC2P26717 231 aa21.73■■□□□ 1.07
LIMD2-209ENST00000580222 GPC3P51654 580 aa21.73■■□□□ 1.07
LIMD2-209ENST00000580222 FOSBP53539 338 aa21.73■■□□□ 1.07
LIMD2-209ENST00000580222 GIT2Q14161 759 aa21.73■■□□□ 1.07
LIMD2-209ENST00000580222 ZNF280BQ86YH2 543 aa21.73■■□□□ 1.07
LIMD2-209ENST00000580222 C1orf210Q8IVY1 113 aa21.73■■□□□ 1.07
LIMD2-209ENST00000580222 RIC8AQ9NPQ8 531 aa21.73■■□□□ 1.07
LIMD2-209ENST00000580222 FOXD4L1Q9NU39 408 aa21.73■■□□□ 1.07
LIMD2-209ENST00000580222 EVPLQ92817 2033 aa21.73■■□□□ 1.07
LIMD2-209ENST00000580222 IGLV3-22A0A075B6J6 115 aa21.72■■□□□ 1.07
LIMD2-209ENST00000580222 GJB2P29033 226 aa21.72■■□□□ 1.07
LIMD2-209ENST00000580222 SREBF1P36956 1147 aa21.72■■□□□ 1.07
LIMD2-209ENST00000580222 PHKA2P46019 1235 aa21.72■■□□□ 1.07
LIMD2-209ENST00000580222 DRP2Q13474 957 aa21.72■■□□□ 1.07
LIMD2-209ENST00000580222 PPFIBP1Q86W92 1011 aa21.72■■□□□ 1.07
LIMD2-209ENST00000580222 PLA2G4DQ86XP0 818 aa21.72■■□□□ 1.07
LIMD2-209ENST00000580222 FOXQ1Q9C009 403 aa21.72■■□□□ 1.07
LIMD2-209ENST00000580222 SH3GLB2Q9NR46 395 aa21.72■■□□□ 1.07
LIMD2-209ENST00000580222 SIT1Q9Y3P8 196 aa21.72■■□□□ 1.07
LIMD2-209ENST00000580222 SPDYE4A6NLX3 237 aa21.71■■□□□ 1.07
LIMD2-209ENST00000580222 ZNF862O60290 1169 aa21.71■■□□□ 1.07
LIMD2-209ENST00000580222 GBP2P32456 591 aaPredicted RBP21.71■■□□□ 1.07
LIMD2-209ENST00000580222 AFF1P51825 1210 aaKnown RBP21.71■■□□□ 1.07
LIMD2-209ENST00000580222 ADCY7P51828 1080 aa21.71■■□□□ 1.07
LIMD2-209ENST00000580222 ATXN1P54253 815 aaKnown RBP21.71■■□□□ 1.07
LIMD2-209ENST00000580222 C15orf39Q6ZRI6 1047 aa21.71■■□□□ 1.07
LIMD2-209ENST00000580222 NIPA1Q7RTP0 329 aa21.71■■□□□ 1.07
LIMD2-209ENST00000580222 INTS4Q96HW7 963 aaKnown RBP21.71■■□□□ 1.07
LIMD2-209ENST00000580222 GBP3Q9H0R5 595 aa21.71■■□□□ 1.07
LIMD2-209ENST00000580222 WDR6Q9NNW5 1121 aaKnown RBP21.71■■□□□ 1.07
LIMD2-209ENST00000580222 EPS15L1Q9UBC2 864 aa21.71■■□□□ 1.07
LIMD2-209ENST00000580222 GABBR1Q9UBS5 961 aa21.71■■□□□ 1.07
LIMD2-209ENST00000580222 INPP5FQ9Y2H2 1132 aa21.71■■□□□ 1.07
LIMD2-209ENST00000580222 SMCO2A6NFE2 343 aa21.7■■□□□ 1.06
LIMD2-209ENST00000580222 IPO5O00410 1097 aaKnown RBP21.7■■□□□ 1.06
LIMD2-209ENST00000580222 MAGEB2O15479 319 aa21.7■■□□□ 1.06
LIMD2-209ENST00000580222 OFD1O75665 1012 aa21.7■■□□□ 1.06
LIMD2-209ENST00000580222 SRFP11831 508 aa21.7■■□□□ 1.06
LIMD2-209ENST00000580222 RFX1P22670 979 aa21.7■■□□□ 1.06
LIMD2-209ENST00000580222 ZNF76P36508 570 aa21.7■■□□□ 1.06
LIMD2-209ENST00000580222 NLRP5P59047 1200 aa21.7■■□□□ 1.06
LIMD2-209ENST00000580222 TRIM29Q14134 588 aa21.7■■□□□ 1.06
LIMD2-209ENST00000580222 NOMO2Q5JPE7 1267 aa21.7■■□□□ 1.06
LIMD2-209ENST00000580222 PHLDB3Q6NSJ2 640 aa21.7■■□□□ 1.06
LIMD2-209ENST00000580222 TAS1R1Q7RTX1 841 aa21.7■■□□□ 1.06
LIMD2-209ENST00000580222 MAP7D2Q96T17 732 aa21.7■■□□□ 1.06
LIMD2-209ENST00000580222 C6orf50Q9HD87 102 aa21.7■■□□□ 1.06
LIMD2-209ENST00000580222 CCDC195A0A1B0GUA6 201 aa21.69■■□□□ 1.06
LIMD2-209ENST00000580222 ESYT2A0FGR8 921 aa21.69■■□□□ 1.06
LIMD2-209ENST00000580222 RFPL2O75678 378 aa21.69■■□□□ 1.06
LIMD2-209ENST00000580222 DDHD2O94830 711 aa21.69■■□□□ 1.06
LIMD2-209ENST00000580222 FOSP01100 380 aaPredicted RBP21.69■■□□□ 1.06
LIMD2-209ENST00000580222 CLK2P49760 499 aaKnown RBP21.69■■□□□ 1.06
LIMD2-209ENST00000580222 CMASQ8NFW8 434 aaPredicted RBP21.69■■□□□ 1.06
LIMD2-209ENST00000580222 CRYGNQ8WXF5 182 aa21.69■■□□□ 1.06
LIMD2-209ENST00000580222 MAN1C1Q9NR34 630 aa21.69■■□□□ 1.06
LIMD2-209ENST00000580222 GNA11P29992 359 aa21.68■■□□□ 1.06
LIMD2-209ENST00000580222 ZC3H14Q6PJT7 736 aaKnown RBP21.68■■□□□ 1.06
LIMD2-209ENST00000580222 FAM177A1Q8N128 213 aaPredicted RBP21.68■■□□□ 1.06
LIMD2-209ENST00000580222 ZNF707Q96C28 371 aaPredicted RBP21.68■■□□□ 1.06
LIMD2-209ENST00000580222 C8orf76Q96K31 380 aa21.68■■□□□ 1.06
LIMD2-209ENST00000580222 RPP25Q9BUL9 199 aaKnown RBP21.68■■□□□ 1.06
LIMD2-209ENST00000580222 EMILIN2Q9BXX0 1053 aa21.68■■□□□ 1.06
LIMD2-209ENST00000580222 ZMYND12Q9H0C1 365 aa21.68■■□□□ 1.06
LIMD2-209ENST00000580222 GLT8D2Q9H1C3 349 aa21.68■■□□□ 1.06
LIMD2-209ENST00000580222 ARHGEF3Q9NR81 526 aa21.68■■□□□ 1.06
LIMD2-209ENST00000580222 DACT1Q9NYF0 836 aa21.68■■□□□ 1.06
LIMD2-209ENST00000580222 KCNJ14Q9UNX9 436 aa21.68■■□□□ 1.06
LIMD2-209ENST00000580222 USP24Q9UPU5 2620 aa21.67■■□□□ 1.06
LIMD2-209ENST00000580222 MAP1BP46821 2468 aaKnown RBP21.67■■□□□ 1.06
LIMD2-209ENST00000580222 CLUHO75153 1309 aa21.67■■□□□ 1.06
LIMD2-209ENST00000580222 C2CD2LO14523 706 aa21.67■■□□□ 1.06
LIMD2-209ENST00000580222 ZNF746Q6NUN9 644 aaPredicted RBP21.67■■□□□ 1.06
LIMD2-209ENST00000580222 GLB1LQ6UWU2 654 aa21.67■■□□□ 1.06
LIMD2-209ENST00000580222 SPRYD3Q8NCJ5 442 aa21.67■■□□□ 1.06
LIMD2-209ENST00000580222 BICD2Q8TD16 824 aa21.67■■□□□ 1.06
LIMD2-209ENST00000580222 NLRP7Q8WX94 980 aa21.67■■□□□ 1.06
LIMD2-209ENST00000580222 SCLT1Q96NL6 688 aa21.67■■□□□ 1.06
LIMD2-209ENST00000580222 ZNF577Q9BSK1 485 aa21.67■■□□□ 1.06
LIMD2-209ENST00000580222 TRAIPQ9BWF2 469 aa21.67■■□□□ 1.06
LIMD2-209ENST00000580222 GJB4Q9NTQ9 266 aa21.67■■□□□ 1.06
LIMD2-209ENST00000580222 PCDHA10Q9Y5I2 948 aa21.67■■□□□ 1.06
LIMD2-209ENST00000580222 CACNA1IQ9P0X4 2223 aa21.66■■□□□ 1.06
LIMD2-209ENST00000580222 PSAPP07602 524 aa21.66■■□□□ 1.06
LIMD2-209ENST00000580222 SPATA31D3P0C874 917 aa21.66■■□□□ 1.06
LIMD2-209ENST00000580222 TMOD1P28289 359 aa21.66■■□□□ 1.06
LIMD2-209ENST00000580222 GUCY1B3Q02153 619 aa21.66■■□□□ 1.06
LIMD2-209ENST00000580222 UGCGQ16739 394 aa21.66■■□□□ 1.06
LIMD2-209ENST00000580222 VARS2Q5ST30 1063 aaKnown RBP21.66■■□□□ 1.06
LIMD2-209ENST00000580222 JAKMIP3Q5VZ66 844 aa21.66■■□□□ 1.06
LIMD2-209ENST00000580222 DCLRE1AQ6PJP8 1040 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms