RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TM6SF1Q9BZW5 370 aa20.01■□□□□ 0.79
MKS1-209ENST00000580127 RSAD1Q9HA92 442 aa20.01■□□□□ 0.79
MKS1-209ENST00000580127 AGPAT5Q9NUQ2 364 aa20.01■□□□□ 0.79
MKS1-209ENST00000580127 M0R2N6 131 aa20■□□□□ 0.79
MKS1-209ENST00000580127 TBX3O15119 743 aa20■□□□□ 0.79
MKS1-209ENST00000580127 GFRA3O60609 400 aa20■□□□□ 0.79
MKS1-209ENST00000580127 ERLIN2O94905 339 aa20■□□□□ 0.79
MKS1-209ENST00000580127 BRD1O95696 1058 aa20■□□□□ 0.79
MKS1-209ENST00000580127 WEE2P0C1S8 567 aa20■□□□□ 0.79
MKS1-209ENST00000580127 TOB2Q14106 344 aaPredicted RBP20■□□□□ 0.79
MKS1-209ENST00000580127 ASTLQ6HA08 431 aaPredicted RBP20■□□□□ 0.79
MKS1-209ENST00000580127 PPP4R3AQ6IN85 833 aa20■□□□□ 0.79
MKS1-209ENST00000580127 TMC5Q6UXY8 1006 aa20■□□□□ 0.79
MKS1-209ENST00000580127 CCDC149Q6ZUS6 474 aa20■□□□□ 0.79
MKS1-209ENST00000580127 NEK8Q86SG6 692 aa20■□□□□ 0.79
MKS1-209ENST00000580127 IFT122Q9HBG6 1241 aa20■□□□□ 0.79
MKS1-209ENST00000580127 KMT2EQ8IZD2 1858 aa20■□□□□ 0.79
MKS1-209ENST00000580127 CACNA1HO95180 2353 aa19.99■□□□□ 0.79
MKS1-209ENST00000580127 H0Y858 1186 aa19.99■□□□□ 0.79
MKS1-209ENST00000580127 SLC11A1P49279 550 aa19.99■□□□□ 0.79
MKS1-209ENST00000580127 CLCN5P51795 746 aa19.99■□□□□ 0.79
MKS1-209ENST00000580127 LAMTOR4Q0VGL1 99 aa19.99■□□□□ 0.79
MKS1-209ENST00000580127 STK3Q13188 491 aa19.99■□□□□ 0.79
MKS1-209ENST00000580127 MXD4Q14582 209 aaPredicted RBP19.99■□□□□ 0.79
MKS1-209ENST00000580127 EPHA7Q15375 998 aa19.99■□□□□ 0.79
MKS1-209ENST00000580127 PLA2G4FQ68DD2 849 aa19.99■□□□□ 0.79
MKS1-209ENST00000580127 GPR149Q86SP6 731 aa19.99■□□□□ 0.79
MKS1-209ENST00000580127 C4orf19Q8IY42 314 aa19.99■□□□□ 0.79
MKS1-209ENST00000580127 SLFN12Q8IYM2 578 aa19.99■□□□□ 0.79
MKS1-209ENST00000580127 HACE1Q8IYU2 909 aa19.99■□□□□ 0.79
MKS1-209ENST00000580127 DHX33Q9H6R0 707 aaKnown RBP19.99■□□□□ 0.79
MKS1-209ENST00000580127 ZSWIM4Q9H7M6 989 aa19.99■□□□□ 0.79
MKS1-209ENST00000580127 DNAJB4Q9UDY4 337 aa19.99■□□□□ 0.79
MKS1-209ENST00000580127 CCNT1O60563 726 aaKnown RBP19.98■□□□□ 0.79
MKS1-209ENST00000580127 ITGA4P13612 1032 aa19.98■□□□□ 0.79
MKS1-209ENST00000580127 AXLP30530 894 aa19.98■□□□□ 0.79
MKS1-209ENST00000580127 NPEPPSP55786 919 aa19.98■□□□□ 0.79
MKS1-209ENST00000580127 TFDP1Q14186 410 aa19.98■□□□□ 0.79
MKS1-209ENST00000580127 PTPN14Q15678 1187 aa19.98■□□□□ 0.79
MKS1-209ENST00000580127 CYP26C1Q6V0L0 522 aa19.98■□□□□ 0.79
MKS1-209ENST00000580127 TMEM173Q86WV6 379 aaPredicted RBP19.98■□□□□ 0.79
MKS1-209ENST00000580127 ZNF280BQ86YH2 543 aa19.98■□□□□ 0.79
MKS1-209ENST00000580127 WASF1Q92558 559 aa19.98■□□□□ 0.79
MKS1-209ENST00000580127 TMEM143Q96AN5 459 aa19.98■□□□□ 0.79
MKS1-209ENST00000580127 KLHL5Q96PQ7 755 aa19.98■□□□□ 0.79
MKS1-209ENST00000580127 PDRG1Q9NUG6 133 aa19.98■□□□□ 0.79
MKS1-209ENST00000580127 CDH22Q9UJ99 828 aa19.98■□□□□ 0.79
MKS1-209ENST00000580127 EML1O00423 815 aa19.97■□□□□ 0.79
MKS1-209ENST00000580127 PDGFBP01127 241 aaPredicted RBP19.97■□□□□ 0.79
MKS1-209ENST00000580127 SSBP05455 408 aaKnown RBP eCLIP19.97■□□□□ 0.79
MKS1-209ENST00000580127 URODP06132 367 aa19.97■□□□□ 0.79
MKS1-209ENST00000580127 ASGR2P07307 311 aa19.97■□□□□ 0.79
MKS1-209ENST00000580127 ADH1AP07327 375 aa19.97■□□□□ 0.79
MKS1-209ENST00000580127 NCLP19338 710 aaKnown RBP19.97■□□□□ 0.79
MKS1-209ENST00000580127 YWHABP31946 246 aaKnown RBP19.97■□□□□ 0.79
MKS1-209ENST00000580127 TDGQ13569 410 aa19.97■□□□□ 0.79
MKS1-209ENST00000580127 XKR9Q5GH70 373 aa19.97■□□□□ 0.79
MKS1-209ENST00000580127 AGMOQ6ZNB7 445 aa19.97■□□□□ 0.79
MKS1-209ENST00000580127 C15orf39Q6ZRI6 1047 aa19.97■□□□□ 0.79
MKS1-209ENST00000580127 CCDC51Q96ER9 411 aa19.97■□□□□ 0.79
MKS1-209ENST00000580127 KCNMB3Q9NPA1 279 aa19.97■□□□□ 0.79
MKS1-209ENST00000580127 FAM86C1Q9NVL1 165 aa19.97■□□□□ 0.79
MKS1-209ENST00000580127 ZFHX2Q9C0A1 2572 aaPredicted RBP19.96■□□□□ 0.79
MKS1-209ENST00000580127 MEIS3P2A8K0S8 358 aa19.96■□□□□ 0.79
MKS1-209ENST00000580127 NRP1O14786 923 aa19.96■□□□□ 0.79
MKS1-209ENST00000580127 SLC37A4O43826 429 aa19.96■□□□□ 0.79
MKS1-209ENST00000580127 CNPP09543 421 aaKnown RBP19.96■□□□□ 0.79
MKS1-209ENST00000580127 CLCN4P51793 760 aa19.96■□□□□ 0.79
MKS1-209ENST00000580127 RNF149Q8NC42 400 aa19.96■□□□□ 0.79
MKS1-209ENST00000580127 STAMQ92783 540 aa19.96■□□□□ 0.79
MKS1-209ENST00000580127 CCDC43Q96MW1 224 aaKnown RBP19.96■□□□□ 0.79
MKS1-209ENST00000580127 PHF20Q9BVI0 1012 aa19.96■□□□□ 0.79
MKS1-209ENST00000580127 BRMS1Q9HCU9 246 aa19.96■□□□□ 0.79
MKS1-209ENST00000580127 IGSF9Q9P2J2 1179 aa19.96■□□□□ 0.79
MKS1-209ENST00000580127 VAV3Q9UKW4 847 aa19.96■□□□□ 0.79
MKS1-209ENST00000580127 KCNJ14Q9UNX9 436 aa19.96■□□□□ 0.79
MKS1-209ENST00000580127 PTPRZ1P23471 2315 aaPredicted RBP19.96■□□□□ 0.79
MKS1-209ENST00000580127 PROB1E7EW31 1015 aa19.95■□□□□ 0.78
MKS1-209ENST00000580127 DDHD2O94830 711 aa19.95■□□□□ 0.78
MKS1-209ENST00000580127 POMCP01189 267 aa19.95■□□□□ 0.78
MKS1-209ENST00000580127 SOD2P04179 222 aa19.95■□□□□ 0.78
MKS1-209ENST00000580127 HOXA11P31270 313 aaPredicted RBP19.95■□□□□ 0.78
MKS1-209ENST00000580127 AK2P54819 239 aa19.95■□□□□ 0.78
MKS1-209ENST00000580127 EMC2Q15006 297 aa19.95■□□□□ 0.78
MKS1-209ENST00000580127 KANK3Q6NY19 840 aa19.95■□□□□ 0.78
MKS1-209ENST00000580127 NOTUMQ6P988 496 aa19.95■□□□□ 0.78
MKS1-209ENST00000580127 FERMT3Q86UX7 667 aa19.95■□□□□ 0.78
MKS1-209ENST00000580127 TPH2Q8IWU9 490 aa19.95■□□□□ 0.78
MKS1-209ENST00000580127 MTRQ99707 1265 aa19.95■□□□□ 0.78
MKS1-209ENST00000580127 LARP6Q9BRS8 491 aaKnown RBP19.95■□□□□ 0.78
MKS1-209ENST00000580127 LXNQ9BS40 222 aa19.95■□□□□ 0.78
MKS1-209ENST00000580127 COLEC11Q9BWP8 271 aa19.95■□□□□ 0.78
MKS1-209ENST00000580127 TRIM6Q9C030 488 aaPredicted RBP19.95■□□□□ 0.78
MKS1-209ENST00000580127 FBXL21Q9UKT6 434 aa19.95■□□□□ 0.78
MKS1-209ENST00000580127 OR1G1P47890 313 aa19.94■□□□□ 0.78
MKS1-209ENST00000580127 POU5F1BQ06416 359 aa19.94■□□□□ 0.78
MKS1-209ENST00000580127 NPY5RQ15761 445 aa19.94■□□□□ 0.78
MKS1-209ENST00000580127 NCAPH2Q6IBW4 605 aa19.94■□□□□ 0.78
MKS1-209ENST00000580127 PIK3AP1Q6ZUJ8 805 aa19.94■□□□□ 0.78
MKS1-209ENST00000580127 CMASQ8NFW8 434 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms