RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 EEF2KMTQ96G04 330 aa15.21■□□□□ 0.03
TSEN54-206ENST00000579449 INO80BQ9C086 356 aaPredicted RBP15.21■□□□□ 0.03
TSEN54-206ENST00000579449 MCOLN1Q9GZU1 580 aa15.21■□□□□ 0.03
TSEN54-206ENST00000579449 MINDY3Q9H8M7 445 aa15.21■□□□□ 0.03
TSEN54-206ENST00000579449 CDHR5Q9HBB8 845 aa15.21■□□□□ 0.03
TSEN54-206ENST00000579449 AGPAT3Q9NRZ7 376 aa15.21■□□□□ 0.03
TSEN54-206ENST00000579449 TRMT13Q9NUP7 481 aaKnown RBP15.21■□□□□ 0.03
TSEN54-206ENST00000579449 CGNQ9P2M7 1197 aaKnown RBP15.21■□□□□ 0.03
TSEN54-206ENST00000579449 USP20Q9Y2K6 914 aa15.21■□□□□ 0.03
TSEN54-206ENST00000579449 FGFR1OPO95684 399 aaKnown RBP15.2■□□□□ 0.02
TSEN54-206ENST00000579449 PIGRP01833 764 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 NR3C1P04150 777 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 ATP1A3P13637 1013 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 CDK11BP21127 795 aaKnown RBP15.2■□□□□ 0.02
TSEN54-206ENST00000579449 GJA8P48165 433 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 SNRPFP62306 86 aaKnown RBP15.2■□□□□ 0.02
TSEN54-206ENST00000579449 PLCB2Q00722 1185 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 MBTD1Q05BQ5 628 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 PTK7Q13308 1070 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 ADAM9Q13443 819 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 SLC39A4Q6P5W5 647 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 SRGAP1Q7Z6B7 1085 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 RSPH3Q86UC2 560 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 IRF2BP1Q8IU81 584 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 CEP63Q96MT8 703 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 TARS2Q9BW92 718 aaKnown RBP15.2■□□□□ 0.02
TSEN54-206ENST00000579449 SEZ6LQ9BYH1 1024 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 GCOM2Q9BZD3 368 aaPredicted RBP15.2■□□□□ 0.02
TSEN54-206ENST00000579449 FZD8Q9H461 694 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 GINS2Q9Y248 185 aa15.2■□□□□ 0.02
TSEN54-206ENST00000579449 DNAH12Q6ZR08 3092 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 KIAA0100Q14667 2235 aaKnown RBP15.19■□□□□ 0.02
TSEN54-206ENST00000579449 HNRNPDLO14979 420 aaKnown RBP15.19■□□□□ 0.02
TSEN54-206ENST00000579449 CETN3O15182 167 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 AP5Z1O43299 807 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 B4GALT4O60513 344 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 CSDE1O75534 798 aaKnown RBP15.19■□□□□ 0.02
TSEN54-206ENST00000579449 IQCF3P0C7M6 154 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 NR2F2P24468 414 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 RPL13P26373 211 aaKnown RBP15.19■□□□□ 0.02
TSEN54-206ENST00000579449 LIG4P49917 911 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 CDK7P50613 346 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 MRPS6P82932 125 aaKnown RBP15.19■□□□□ 0.02
TSEN54-206ENST00000579449 FAM187BQ17R55 369 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 ARMCX5Q6P1M9 558 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 FILIP1Q7Z7B0 1213 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 RPAINQ86UA6 219 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 C12orf56Q8IXR9 622 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 ZNF710Q8N1W2 664 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 DHX38Q92620 1227 aaKnown RBP15.19■□□□□ 0.02
TSEN54-206ENST00000579449 OSMRQ99650 979 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 MRPL4Q9BYD3 311 aaKnown RBP15.19■□□□□ 0.02
TSEN54-206ENST00000579449 SENP6Q9GZR1 1112 aaPredicted RBP15.19■□□□□ 0.02
TSEN54-206ENST00000579449 TRPV6Q9H1D0 765 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 PCIF1Q9H4Z3 704 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 PRMT7Q9NVM4 692 aaPredicted RBP15.19■□□□□ 0.02
TSEN54-206ENST00000579449 DMAC2Q9NW81 257 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 NOD1Q9Y239 953 aa15.19■□□□□ 0.02
TSEN54-206ENST00000579449 TTLL13PA6NNM8 815 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 KCNJ18B7U540 433 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 M0QZ92 97 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 ACKR2O00590 384 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 RPLP2P05387 115 aaKnown RBP15.18■□□□□ 0.02
TSEN54-206ENST00000579449 DARSP14868 501 aaKnown RBP15.18■□□□□ 0.02
TSEN54-206ENST00000579449 ADSSP30520 456 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 CYP2J2P51589 502 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 CRYBB1P53674 252 aaPredicted RBP15.18■□□□□ 0.02
TSEN54-206ENST00000579449 FANCCQ00597 558 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 MYBPC2Q14324 1141 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 KCNJ12Q14500 433 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 AMHR2Q16671 573 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 TRIM71Q2Q1W2 868 aaKnown RBP15.18■□□□□ 0.02
TSEN54-206ENST00000579449 TCP11X2Q5H9J9 407 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 CREBRFQ8IUR6 639 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 SLC9A9Q8IVB4 645 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 FAM114A1Q8IWE2 563 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 DIS3LQ8TF46 1054 aaKnown RBP15.18■□□□□ 0.02
TSEN54-206ENST00000579449 ZBTB45Q96K62 511 aaPredicted RBP15.18■□□□□ 0.02
TSEN54-206ENST00000579449 CNOT6LQ96LI5 555 aaKnown RBP15.18■□□□□ 0.02
TSEN54-206ENST00000579449 ACO2Q99798 780 aaKnown RBP15.18■□□□□ 0.02
TSEN54-206ENST00000579449 CBWD1Q9BRT8 395 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 TMEM106CQ9BVX2 250 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 CELF4Q9BZC1 486 aaKnown RBP15.18■□□□□ 0.02
TSEN54-206ENST00000579449 MAGEC2Q9UBF1 373 aaPredicted RBP15.18■□□□□ 0.02
TSEN54-206ENST00000579449 TRPV2Q9Y5S1 764 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 CDY2AQ9Y6F7 541 aa15.18■□□□□ 0.02
TSEN54-206ENST00000579449 B4GALT5O43286 388 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 GARTP22102 1010 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 FGFR4P22455 802 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 THPOP40225 353 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 CASP4P49662 377 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 SPAG1Q07617 926 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 MGAT3Q09327 533 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 PRPF4BQ13523 1007 aaKnown RBP15.17■□□□□ 0.02
TSEN54-206ENST00000579449 SNX17Q15036 470 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 CEP135Q66GS9 1140 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 SARM1Q6SZW1 724 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 ZPBP2Q6X784 338 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 SLC39A5Q6ZMH5 540 aa15.17■□□□□ 0.02
TSEN54-206ENST00000579449 ANKLE1Q8NAG6 615 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms