RNA–Protein interactions for RNA: ENST00000579344.1

CCR7-203, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 1 (best) BASIC

Gene CCR7, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-203ENST00000579344 IL17RBQ9NRM6 502 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 SHANK3Q9BYB0 1731 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 COQ9O75208 318 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 BRAFP15056 766 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 MUTP22033 750 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 FGFR4P22455 802 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 MARK3P27448 753 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 PTPN4P29074 926 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 IGHMBP2P38935 993 aaKnown RBP17.14■□□□□ 0.33
CCR7-203ENST00000579344 MAGEA8P43361 318 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 SLCO1A2P46721 670 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 LRRC14Q15048 493 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 PABPC1LQ4VXU2 614 aaKnown RBP17.14■□□□□ 0.33
CCR7-203ENST00000579344 TOM1L2Q6ZVM7 507 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 REXO1Q8N1G1 1221 aaKnown RBP17.14■□□□□ 0.33
CCR7-203ENST00000579344 LNX1Q8TBB1 728 aaPredicted RBP17.14■□□□□ 0.33
CCR7-203ENST00000579344 C18orf8Q96DM3 657 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 PITPNM3Q9BZ71 974 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 CCDC113Q9H0I3 377 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 VCX3BQ9H321 246 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 VCX3AQ9NNX9 186 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 EMILIN3Q9NT22 766 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 NMRK1Q9NWW6 199 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 DDX43Q9NXZ2 648 aaKnown RBP17.14■□□□□ 0.33
CCR7-203ENST00000579344 TMCO1Q9UM00 188 aa17.14■□□□□ 0.33
CCR7-203ENST00000579344 LAMB2P55268 1798 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 NUP98P52948 1817 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 ANKRD62A6NC57 917 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 CREB3O43889 395 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 PDHA1P08559 390 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 ACTN1P12814 892 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 RFC5P40937 340 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 RNASELQ05823 741 aaKnown RBP17.13■□□□□ 0.33
CCR7-203ENST00000579344 ENOX2Q16206 610 aaKnown RBP17.13■□□□□ 0.33
CCR7-203ENST00000579344 SLC45A4Q5BKX6 768 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 SOGA3Q5TF21 947 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 KCNK18Q7Z418 384 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 LONP2Q86WA8 852 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 DNAJC10Q8IXB1 793 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 LRRC8CQ8TDW0 803 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 LZICQ8WZA0 190 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 ALG3Q92685 438 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 PCMTD2Q9NV79 361 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 MTUS1Q9ULD2 1270 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 PHF24Q9UPV7 400 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 CHKBQ9Y259 395 aa17.13■□□□□ 0.33
CCR7-203ENST00000579344 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.13■□□□□ 0.33
CCR7-203ENST00000579344 TOGARAM1Q9Y4F4 1720 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 PDXKO00764 312 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 MAP3K13O43283 966 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 MTA2O94776 668 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 TJP3O95049 919 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 TTC4O95801 387 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 T-ENOLP0DO92 83 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 XRCC5P13010 732 aaKnown RBP17.12■□□□□ 0.33
CCR7-203ENST00000579344 ITIH2P19823 946 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 SOX5P35711 763 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 COILP38432 576 aaPredicted RBP17.12■□□□□ 0.33
CCR7-203ENST00000579344 CALCOCO2Q13137 446 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 UBE4AQ14139 1066 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 MPP2Q14168 576 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 ANKRD35Q8N283 1001 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 ZNF384Q8TF68 577 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 ERP27Q96DN0 273 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 MMADHCQ9H3L0 296 aaPredicted RBP17.12■□□□□ 0.33
CCR7-203ENST00000579344 CDC42EP4Q9H3Q1 356 aaKnown RBP17.12■□□□□ 0.33
CCR7-203ENST00000579344 EURLQ9NYK6 297 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 ABCF2Q9UG63 623 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 SPATA31A1Q5TZJ5 1347 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 CDH16O75309 829 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 SETSIPP0DME0 302 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 KRT13P13646 458 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 NR2F2P24468 414 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 GIT2Q14161 759 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 BMT2Q1RMZ1 405 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 CCDC137Q6PK04 289 aaKnown RBP17.12■□□□□ 0.33
CCR7-203ENST00000579344 ZSWIM1Q9BR11 485 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 STK33Q9BYT3 514 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 DENND2DQ9H6A0 471 aaPredicted RBP17.12■□□□□ 0.33
CCR7-203ENST00000579344 LRRC19Q9H756 370 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 OSGEPQ9NPF4 335 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 IL1RAPL1Q9NZN1 696 aa17.12■□□□□ 0.33
CCR7-203ENST00000579344 BAZ2BQ9UIF8 2168 aaKnown RBP17.11■□□□□ 0.33
CCR7-203ENST00000579344 TFAP4Q01664 338 aa17.11■□□□□ 0.33
CCR7-203ENST00000579344 PRPF4BQ13523 1007 aaKnown RBP17.11■□□□□ 0.33
CCR7-203ENST00000579344 NFIL3Q16649 462 aa17.11■□□□□ 0.33
CCR7-203ENST00000579344 FOXB2Q5VYV0 432 aa17.11■□□□□ 0.33
CCR7-203ENST00000579344 TTC27Q6P3X3 843 aa17.11■□□□□ 0.33
CCR7-203ENST00000579344 C4orf50Q6ZRC1 276 aa17.11■□□□□ 0.33
CCR7-203ENST00000579344 EPM2AIP1Q7L775 607 aaPredicted RBP17.11■□□□□ 0.33
CCR7-203ENST00000579344 STKLD1Q8NE28 680 aa17.11■□□□□ 0.33
CCR7-203ENST00000579344 NSUN4Q96CB9 384 aaKnown RBP17.11■□□□□ 0.33
CCR7-203ENST00000579344 HAPLN3Q96S86 360 aa17.11■□□□□ 0.33
CCR7-203ENST00000579344 NAP1L4Q99733 375 aaKnown RBP17.11■□□□□ 0.33
CCR7-203ENST00000579344 DDX23Q9BUQ8 820 aaKnown RBP17.11■□□□□ 0.33
CCR7-203ENST00000579344 WNT8AQ9H1J5 351 aa17.11■□□□□ 0.33
CCR7-203ENST00000579344 AAASQ9NRG9 546 aa17.11■□□□□ 0.33
CCR7-203ENST00000579344 ATXN10Q9UBB4 475 aa17.11■□□□□ 0.33
CCR7-203ENST00000579344 FRMPD4Q14CM0 1322 aa17.1■□□□□ 0.33
CCR7-203ENST00000579344 CALUO43852 315 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms