RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 AGMOQ6ZNB7 445 aa21.49■■□□□ 1.03
CDKN2A-213ENST00000579122 SRGAP1Q7Z6B7 1085 aa21.49■■□□□ 1.03
CDKN2A-213ENST00000579122 GPR149Q86SP6 731 aa21.49■■□□□ 1.03
CDKN2A-213ENST00000579122 FAM20AQ96MK3 541 aa21.49■■□□□ 1.03
CDKN2A-213ENST00000579122 TMEM175Q9BSA9 504 aa21.49■■□□□ 1.03
CDKN2A-213ENST00000579122 KCNMB3Q9NPA1 279 aa21.49■■□□□ 1.03
CDKN2A-213ENST00000579122 KANSL3Q9P2N6 904 aa21.49■■□□□ 1.03
CDKN2A-213ENST00000579122 CYP46A1Q9Y6A2 500 aa21.49■■□□□ 1.03
CDKN2A-213ENST00000579122 CNTNAP2Q9UHC6 1331 aa21.49■■□□□ 1.03
CDKN2A-213ENST00000579122 DDHD2O94830 711 aa21.48■■□□□ 1.03
CDKN2A-213ENST00000579122 P4HBP07237 508 aaKnown RBP21.48■■□□□ 1.03
CDKN2A-213ENST00000579122 RFC5P40937 340 aa21.48■■□□□ 1.03
CDKN2A-213ENST00000579122 LETM2Q2VYF4 491 aa21.48■■□□□ 1.03
CDKN2A-213ENST00000579122 PPP4R3AQ6IN85 833 aa21.48■■□□□ 1.03
CDKN2A-213ENST00000579122 TMEM105Q8N8V8 129 aa21.48■■□□□ 1.03
CDKN2A-213ENST00000579122 PRPF31Q8WWY3 499 aaKnown RBP21.48■■□□□ 1.03
CDKN2A-213ENST00000579122 PSPC1Q8WXF1 523 aaKnown RBP21.48■■□□□ 1.03
CDKN2A-213ENST00000579122 ACSF2Q96CM8 615 aaPredicted RBP21.48■■□□□ 1.03
CDKN2A-213ENST00000579122 CEP170P1Q96L14 293 aa21.48■■□□□ 1.03
CDKN2A-213ENST00000579122 KLHL5Q96PQ7 755 aa21.48■■□□□ 1.03
CDKN2A-213ENST00000579122 DHX33Q9H6R0 707 aaKnown RBP21.48■■□□□ 1.03
CDKN2A-213ENST00000579122 RSAD1Q9HA92 442 aa21.48■■□□□ 1.03
CDKN2A-213ENST00000579122 PROB1E7EW31 1015 aa21.47■■□□□ 1.03
CDKN2A-213ENST00000579122 LILRB3O75022 631 aa21.47■■□□□ 1.03
CDKN2A-213ENST00000579122 ALDH2P05091 517 aa21.47■■□□□ 1.03
CDKN2A-213ENST00000579122 KLRC2P26717 231 aa21.47■■□□□ 1.03
CDKN2A-213ENST00000579122 HOXA11P31270 313 aaPredicted RBP21.47■■□□□ 1.03
CDKN2A-213ENST00000579122 CLCN4P51793 760 aa21.47■■□□□ 1.03
CDKN2A-213ENST00000579122 ASTLQ6HA08 431 aaPredicted RBP21.47■■□□□ 1.03
CDKN2A-213ENST00000579122 ZNF579Q8NAF0 562 aaKnown RBP21.47■■□□□ 1.03
CDKN2A-213ENST00000579122 AIFM3Q96NN9 605 aa21.47■■□□□ 1.03
CDKN2A-213ENST00000579122 FAM193BQ96PV7 902 aaPredicted RBP21.47■■□□□ 1.03
CDKN2A-213ENST00000579122 TM6SF1Q9BZW5 370 aa21.47■■□□□ 1.03
CDKN2A-213ENST00000579122 SLKQ9H2G2 1235 aaPredicted RBP21.47■■□□□ 1.03
CDKN2A-213ENST00000579122 FAN1Q9Y2M0 1017 aa21.47■■□□□ 1.03
CDKN2A-213ENST00000579122 MYO10Q9HD67 2058 aa21.47■■□□□ 1.03
CDKN2A-213ENST00000579122 DENND4AQ7Z401 1863 aa21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 SPDYE4A6NLX3 237 aa21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 GAS2O43903 313 aaKnown RBP21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 CNPP09543 421 aaKnown RBP21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 SRGAP2CP0DJJ0 459 aa21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 GCFC2P16383 781 aaKnown RBP21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 LAMTOR4Q0VGL1 99 aa21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 UBXN11Q5T124 520 aa21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 CCDC149Q6ZUS6 474 aa21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 OTOP3Q7RTS5 596 aa21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 TMEM143Q96AN5 459 aa21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 PHF20Q9BVI0 1012 aa21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 MFSD1Q9H3U5 465 aa21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 MINDY3Q9H8M7 445 aa21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 UBN1Q9NPG3 1134 aa21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 MRPL17Q9NRX2 175 aaKnown RBP21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 WRAP73Q9P2S5 460 aaPredicted RBP21.46■■□□□ 1.03
CDKN2A-213ENST00000579122 CCDC194A0A1B0GVG4 234 aa21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 NRP1O14786 923 aa21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 TBX3O15119 743 aa21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 ASAP2O43150 1006 aa21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 NCLP19338 710 aaKnown RBP21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 CLCN5P51795 746 aa21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 AFF1P51825 1210 aaKnown RBP21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 STK3Q13188 491 aa21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 EPHA7Q15375 998 aa21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 C15orf39Q6ZRI6 1047 aa21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 NEK8Q86SG6 692 aa21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 C4orf19Q8IY42 314 aa21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 CNNM3Q8NE01 707 aa21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 FEZF2Q8TBJ5 459 aa21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 TCP11Q8WWU5 503 aa21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 KCNJ14Q9UNX9 436 aa21.45■■□□□ 1.02
CDKN2A-213ENST00000579122 SOD2P04179 222 aa21.44■■□□□ 1.02
CDKN2A-213ENST00000579122 SSBP05455 408 aaKnown RBP eCLIP21.44■■□□□ 1.02
CDKN2A-213ENST00000579122 YWHABP31946 246 aaKnown RBP21.44■■□□□ 1.02
CDKN2A-213ENST00000579122 OTUD6AQ7L8S5 288 aa21.44■■□□□ 1.02
CDKN2A-213ENST00000579122 NAP1L4Q99733 375 aaKnown RBP21.44■■□□□ 1.02
CDKN2A-213ENST00000579122 LARP6Q9BRS8 491 aaKnown RBP21.44■■□□□ 1.02
CDKN2A-213ENST00000579122 LXNQ9BS40 222 aa21.44■■□□□ 1.02
CDKN2A-213ENST00000579122 SSX2IPQ9Y2D8 614 aa21.44■■□□□ 1.02
CDKN2A-213ENST00000579122 PLXNA3P51805 1871 aa21.43■■□□□ 1.02
CDKN2A-213ENST00000579122 CCNT1O60563 726 aaKnown RBP21.43■■□□□ 1.02
CDKN2A-213ENST00000579122 CDKL5O76039 1030 aa21.43■■□□□ 1.02
CDKN2A-213ENST00000579122 POMCP01189 267 aa21.43■■□□□ 1.02
CDKN2A-213ENST00000579122 NBL1P41271 181 aa21.43■■□□□ 1.02
CDKN2A-213ENST00000579122 TDGQ13569 410 aa21.43■■□□□ 1.02
CDKN2A-213ENST00000579122 EMC2Q15006 297 aa21.43■■□□□ 1.02
CDKN2A-213ENST00000579122 PCBP1Q15365 356 aaKnown RBP eCLIP21.43■■□□□ 1.02
CDKN2A-213ENST00000579122 FERMT3Q86UX7 667 aa21.43■■□□□ 1.02
CDKN2A-213ENST00000579122 RNF149Q8NC42 400 aa21.43■■□□□ 1.02
CDKN2A-213ENST00000579122 SMG8Q8ND04 991 aaKnown RBP21.43■■□□□ 1.02
CDKN2A-213ENST00000579122 CMASQ8NFW8 434 aaPredicted RBP21.43■■□□□ 1.02
CDKN2A-213ENST00000579122 HAS1Q92839 578 aa21.43■■□□□ 1.02
CDKN2A-213ENST00000579122 HERC2P3Q9BVR0 1158 aa21.43■■□□□ 1.02
CDKN2A-213ENST00000579122 INPPL1O15357 1258 aa21.42■■□□□ 1.02
CDKN2A-213ENST00000579122 URODP06132 367 aa21.42■■□□□ 1.02
CDKN2A-213ENST00000579122 ITGA4P13612 1032 aa21.42■■□□□ 1.02
CDKN2A-213ENST00000579122 XBP1P17861 261 aa21.42■■□□□ 1.02
CDKN2A-213ENST00000579122 AXLP30530 894 aa21.42■■□□□ 1.02
CDKN2A-213ENST00000579122 CCDC51Q96ER9 411 aa21.42■■□□□ 1.02
CDKN2A-213ENST00000579122 VPS13AQ96RL7 3174 aa21.42■■□□□ 1.02
CDKN2A-213ENST00000579122 RPS6KC1Q96S38 1066 aa21.42■■□□□ 1.02
CDKN2A-213ENST00000579122 ZSWIM4Q9H7M6 989 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms