RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 PIGOQ8TEQ8 1089 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 RSPH1Q8WYR4 309 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 IGSF21Q96ID5 467 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CPB2Q96IY4 423 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 TRAIPQ9BWF2 469 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CDH22Q9UJ99 828 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 NCOR1O75376 2440 aa10.26□□□□□ -0.77
CDK5RAP3-211ENST00000578996 A0A087WWV3 80 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 POTEMA6NI47 508 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 LOC730098B7Z3J9 87 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 USO1O60763 962 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CLASP2O75122 1294 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ZNF623O75123 536 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 GALTP07902 379 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ITGA4P13612 1032 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 SLC11A1P49279 550 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 GNL2Q13823 731 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 KCNC3Q14003 757 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 TFDP1Q14186 410 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 MXD4Q14582 209 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 TPRNQ4KMQ1 711 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 RARS2Q5T160 578 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CES5AQ6NT32 575 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 SYCE2Q6PIF2 218 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 TMEM184AQ6ZMB5 413 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 AGMOQ6ZNB7 445 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ZNF280BQ86YH2 543 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ASAP3Q8TDY4 903 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 BCL7CQ8WUZ0 217 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 SUSD6Q92537 303 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 APOL6Q9BWW8 343 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 TRIM6Q9C030 488 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ZBP1Q9H171 429 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 S1PR5Q9H228 398 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 XPNPEP1Q9NQW7 623 aa10.25□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CARNS1A5YM72 827 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 B4GALT3O60512 393 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 TSPAN1O60635 241 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 DGAT1O75907 488 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 DDHD2O94830 711 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 WEE2P0C1S8 567 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CTSAP10619 480 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 HOXB8P17481 243 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 HOXA11P31270 313 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 MLH1P40692 756 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 OR1G1P47890 313 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 RARRES1P49788 294 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 AFF1P51825 1210 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ST3GAL1Q11201 340 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CAPSQ13938 189 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 UBXN11Q5T124 520 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 NOTUMQ6P988 496 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 DDX53Q86TM3 631 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 C12orf76Q8N812 135 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 EDAQ92838 391 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 C8orf76Q96K31 380 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 MFSD14AQ96MC6 490 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 HSD17B14Q9BPX1 270 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 EIF2AQ9BY44 585 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 POLR3FQ9H1D9 316 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 TMEM60Q9H2L4 133 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ANKEF1Q9NU02 776 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 FAN1Q9Y2M0 1017 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 PRG3Q9Y2Y8 225 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ARIH1Q9Y4X5 557 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 HES2Q9Y543 173 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 IPPQ9Y573 584 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CNTNAP2Q9UHC6 1331 aa10.24□□□□□ -0.77
CDK5RAP3-211ENST00000578996 TMEM221A6NGB7 291 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 LRRIQ4A6NIV6 560 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 M0R296 226 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 C2CD2LO14523 706 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 NRP1O14786 923 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 LYPLA2O95372 231 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ALDH2P05091 517 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 EPCAMP16422 314 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 NCLP19338 710 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 KLRC2P26717 231 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 AXLP30530 894 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 PTENP60484 403 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ZXDAP98168 799 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 MBTD1Q05BQ5 628 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ITIH3Q06033 890 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 GIT2Q14161 759 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ZNF174Q15697 407 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 TMEM132AQ24JP5 1023 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 KANK3Q6NY19 840 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 TRIM67Q6ZTA4 783 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 MRPL10Q7Z7H8 261 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CABP7Q86V35 215 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CDR2LQ86X02 465 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 FAM184AQ8NB25 1140 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 SMG8Q8ND04 991 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 CNNM3Q8NE01 707 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 PBXIP1Q96AQ6 731 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 MTMR9Q96QG7 549 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 EMILIN2Q9BXX0 1053 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 ADAM7Q9H2U9 754 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 POMKQ9H5K3 350 aa10.23□□□□□ -0.77
CDK5RAP3-211ENST00000578996 UBN1Q9NPG3 1134 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms