RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 HSPBP1Q9NZL4 362 aa22.07■■□□□ 1.12
SMG8-203ENST00000578922 EXOC7Q9UPT5 735 aa22.07■■□□□ 1.12
SMG8-203ENST00000578922 MAFO75444 373 aaPredicted RBP22.06■■□□□ 1.12
SMG8-203ENST00000578922 IGBP1P78318 339 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 TAS1R3Q7RTX0 852 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 RETREG2Q8NC44 543 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 PPTC7Q8NI37 304 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 BICD1Q96G01 975 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 CENPFP49454 3210 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 TRIM49P0CI25 452 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 TRIM49CP0CI26 452 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 CTGFP29279 349 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 SLC9A9Q8IVB4 645 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 NEK11Q8NG66 645 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 OR6J1Q8NGC5 347 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 SAAL1Q96ER3 474 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 CHP1Q99653 195 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 IRX2Q9BZI1 471 aaPredicted RBP22.06■■□□□ 1.12
SMG8-203ENST00000578922 ST7Q9NRC1 585 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 ERAP1Q9NZ08 941 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 ARHGAP28Q9P2N2 729 aa22.06■■□□□ 1.12
SMG8-203ENST00000578922 AOC2O75106 756 aa22.05■■□□□ 1.12
SMG8-203ENST00000578922 CNGA1P29973 690 aa22.05■■□□□ 1.12
SMG8-203ENST00000578922 ADSSP30520 456 aa22.05■■□□□ 1.12
SMG8-203ENST00000578922 TM4SF4P48230 202 aa22.05■■□□□ 1.12
SMG8-203ENST00000578922 DUSP28Q4G0W2 176 aa22.05■■□□□ 1.12
SMG8-203ENST00000578922 ZNF569Q5MCW4 686 aa22.05■■□□□ 1.12
SMG8-203ENST00000578922 DEPTORQ8TB45 409 aa22.05■■□□□ 1.12
SMG8-203ENST00000578922 HNRNPLLQ8WVV9 542 aaKnown RBP22.05■■□□□ 1.12
SMG8-203ENST00000578922 LENG1Q96BZ8 264 aaPredicted RBP22.05■■□□□ 1.12
SMG8-203ENST00000578922 DNAJC7Q99615 494 aa22.05■■□□□ 1.12
SMG8-203ENST00000578922 MKNK1Q9BUB5 465 aa22.05■■□□□ 1.12
SMG8-203ENST00000578922 HNRNPDLO14979 420 aaKnown RBP22.05■■□□□ 1.12
SMG8-203ENST00000578922 SEC31AO94979 1220 aaKnown RBP22.05■■□□□ 1.12
SMG8-203ENST00000578922 ZBED6P86452 979 aa22.05■■□□□ 1.12
SMG8-203ENST00000578922 TSR1Q2NL82 804 aaKnown RBP22.05■■□□□ 1.12
SMG8-203ENST00000578922 SLC39A4Q6P5W5 647 aa22.05■■□□□ 1.12
SMG8-203ENST00000578922 XXYLT1Q8NBI6 393 aa22.05■■□□□ 1.12
SMG8-203ENST00000578922 PRPF31Q8WWY3 499 aaKnown RBP22.05■■□□□ 1.12
SMG8-203ENST00000578922 HVCN1Q96D96 273 aa22.05■■□□□ 1.12
SMG8-203ENST00000578922 ZNF668Q96K58 619 aaPredicted RBP22.05■■□□□ 1.12
SMG8-203ENST00000578922 NLRC4Q9NPP4 1024 aa22.05■■□□□ 1.12
SMG8-203ENST00000578922 TUBBP07437 444 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 ACTN1P12814 892 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 TNFAIP2Q03169 654 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 MKRN4PQ13434 485 aaPredicted RBP22.04■■□□□ 1.12
SMG8-203ENST00000578922 CAPSQ13938 189 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 FIGNQ5HY92 759 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 ARHGAP39Q9C0H5 1083 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 ZNF236Q9UL36 1845 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 CA12O43570 354 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 TOMM70O94826 608 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 GJB1P08034 283 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 SLC9A1P19634 815 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 NAMPTP43490 491 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 SLC26A2P50443 739 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 IQSEC1Q6DN90 963 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 WDR59Q6PJI9 974 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 USP6NLQ92738 828 aa22.04■■□□□ 1.12
SMG8-203ENST00000578922 EMID1Q96A84 441 aaPredicted RBP22.04■■□□□ 1.12
SMG8-203ENST00000578922 DYNC1LI2O43237 492 aaPredicted RBP22.03■■□□□ 1.12
SMG8-203ENST00000578922 HBP1O60381 514 aa22.03■■□□□ 1.12
SMG8-203ENST00000578922 PPP2R5AQ15172 486 aa22.03■■□□□ 1.12
SMG8-203ENST00000578922 WHAMMP3Q1A5X7 153 aa22.03■■□□□ 1.12
SMG8-203ENST00000578922 RRAGAQ7L523 313 aa22.03■■□□□ 1.12
SMG8-203ENST00000578922 CACNA2D4Q7Z3S7 1137 aa22.03■■□□□ 1.12
SMG8-203ENST00000578922 METTL13Q8N6R0 699 aa22.03■■□□□ 1.12
SMG8-203ENST00000578922 NAPGQ99747 312 aaPredicted RBP22.03■■□□□ 1.12
SMG8-203ENST00000578922 GJD2Q9UKL4 321 aa22.03■■□□□ 1.12
SMG8-203ENST00000578922 A0A1W2PQJ5 194 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 NOL4O94818 638 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 SRGAP2CP0DJJ0 459 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 INSRRP14616 1297 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 RGS2P41220 211 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 POLR2FP61218 127 aaKnown RBP22.02■■□□□ 1.12
SMG8-203ENST00000578922 DLG4P78352 724 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 BFSP1Q12934 665 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 STRN3Q13033 797 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 MYBPC2Q14324 1141 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 C12orf56Q8IXR9 622 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 MSL3Q8N5Y2 521 aaKnown RBP22.02■■□□□ 1.12
SMG8-203ENST00000578922 MSANTD4Q8NCY6 345 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 POMGNT1Q8WZA1 660 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 FUT8Q9BYC5 575 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 EPC1Q9H2F5 836 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 RAB21Q9UL25 225 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 K7ERI5 159 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 SASH3O75995 380 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 MMP3P08254 477 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 HOXC6P09630 235 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 IRX5P78411 483 aaPredicted RBP22.02■■□□□ 1.12
SMG8-203ENST00000578922 EXOC3L4Q17RC7 722 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 CBWD2Q8IUF1 395 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 HHIPL1Q96JK4 782 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 C16orf70Q9BSU1 422 aa22.02■■□□□ 1.12
SMG8-203ENST00000578922 LRRC53A6NM62 1247 aa22.01■■□□□ 1.11
SMG8-203ENST00000578922 H0YCG3 227 aa22.01■■□□□ 1.11
SMG8-203ENST00000578922 KRT13P13646 458 aa22.01■■□□□ 1.11
SMG8-203ENST00000578922 CLCN3P51790 818 aa22.01■■□□□ 1.11
SMG8-203ENST00000578922 OLFML2BQ68BL8 750 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms