RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ZC3H11AO75152 810 aaKnown RBP eCLIP12.08□□□□□ -0.48
SKA2-204ENST00000578519 MAFO75444 373 aaPredicted RBP12.08□□□□□ -0.48
SKA2-204ENST00000578519 GH1P01241 217 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 PIGRP01833 764 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 CTAGE8P0CG41 777 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 TXNP10599 105 aaKnown RBP12.08□□□□□ -0.48
SKA2-204ENST00000578519 PRLRP16471 622 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 MCM3P25205 808 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 SOX5P35711 763 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 ARL2P36404 184 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 MXI1P50539 228 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 AP3M2P53677 418 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 SURF1Q15526 300 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 SNRNP35Q16560 246 aaKnown RBP12.08□□□□□ -0.48
SKA2-204ENST00000578519 ASTE1Q2TB18 679 aaPredicted RBP12.08□□□□□ -0.48
SKA2-204ENST00000578519 ZNF484Q5JVG2 852 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 MAP1SQ66K74 1059 aaPredicted RBP12.08□□□□□ -0.48
SKA2-204ENST00000578519 HGSNATQ68CP4 663 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 ENOSF1Q7L5Y1 443 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 CTAGE6Q86UF2 777 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 CTAGE4Q8IX94 777 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 MSL3Q8N5Y2 521 aaKnown RBP12.08□□□□□ -0.48
SKA2-204ENST00000578519 GPR161Q8N6U8 529 aaKnown RBP12.08□□□□□ -0.48
SKA2-204ENST00000578519 ATP8B4Q8TF62 1192 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 ANKRD7Q92527 254 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 RABGGTAQ92696 567 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 MFSD14AQ96MC6 490 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 SPATA33Q96N06 139 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 FNBP1Q96RU3 617 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 CBWD1Q9BRT8 395 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 TMEM8AQ9HCN3 771 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 TXNRD2Q9NNW7 524 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 ZCCHC17Q9NP64 241 aaKnown RBP12.08□□□□□ -0.48
SKA2-204ENST00000578519 RNF14Q9UBS8 474 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 REXO2Q9Y3B8 237 aaKnown RBP12.08□□□□□ -0.48
SKA2-204ENST00000578519 EMSYQ7Z589 1322 aa12.08□□□□□ -0.48
SKA2-204ENST00000578519 LRRIQ4A6NIV6 560 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 MAGEB2O15479 319 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 RRP9O43818 475 aaKnown RBP12.07□□□□□ -0.48
SKA2-204ENST00000578519 PGK2P07205 417 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 HOXC6P09630 235 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 ACTN1P12814 892 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 TCP1P17987 556 aaKnown RBP12.07□□□□□ -0.48
SKA2-204ENST00000578519 TNFAIP3P21580 790 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 MATR3P43243 847 aaKnown RBP eCLIP12.07□□□□□ -0.48
SKA2-204ENST00000578519 CYP27A1Q02318 531 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 ARID5AQ03989 594 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 IRF5Q13568 498 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 TARBP2Q15633 366 aaKnown RBP12.07□□□□□ -0.48
SKA2-204ENST00000578519 NAB2Q15742 525 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 LY6KQ17RY6 165 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 PAPD7Q5XG87 772 aaKnown RBP12.07□□□□□ -0.48
SKA2-204ENST00000578519 IRF2BP2Q7Z5L9 587 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 DPP9Q86TI2 863 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 PSPC1Q8WXF1 523 aaKnown RBP12.07□□□□□ -0.48
SKA2-204ENST00000578519 FBXL18Q96ME1 805 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 GPR20Q99678 358 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 PDCL3Q9H2J4 239 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 BCAS3Q9H6U6 928 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 XPNPEP1Q9NQW7 623 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 FHOD1Q9Y613 1164 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 PAPPA2Q9BXP8 1791 aa12.07□□□□□ -0.48
SKA2-204ENST00000578519 TMEM150BA6NC51 233 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 BTBD19C9JJ37 291 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 ADCY3O60266 1144 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 CELF2O95319 508 aaKnown RBP12.06□□□□□ -0.48
SKA2-204ENST00000578519 H2AFZP0C0S5 128 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 TRIM49P0CI25 452 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 TRIM49CP0CI26 452 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 GJA5P36382 358 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 PAFAH1B1P43034 410 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 JAM2P57087 298 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 INHBEP58166 350 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 CHMP4BP1P59074 171 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 NCBP1Q09161 790 aaKnown RBP12.06□□□□□ -0.48
SKA2-204ENST00000578519 DRAP1Q14919 205 aaPredicted RBP12.06□□□□□ -0.48
SKA2-204ENST00000578519 ZNF792Q3KQV3 632 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 WDR44Q5JSH3 913 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 SPRYD7Q5W111 196 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 CHADLQ6NUI6 762 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 ZPBP2Q6X784 338 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 H2AFVQ71UI9 128 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 EEPD1Q7L9B9 569 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 PLEKHH3Q7Z736 793 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 SYCE1Q8N0S2 351 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 PARD3BQ8TEW8 1205 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 NT5C1BQ96P26 610 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 SH2D3AQ9BRG2 576 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 MRPL4Q9BYD3 311 aaKnown RBP12.06□□□□□ -0.48
SKA2-204ENST00000578519 RRAGCQ9HB90 399 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 SIX2Q9NPC8 291 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 ERAP1Q9NZ08 941 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 ADAMTS1Q9UHI8 967 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 AGO2Q9UKV8 859 aaKnown RBP12.06□□□□□ -0.48
SKA2-204ENST00000578519 STYXL1Q9Y6J8 313 aa12.06□□□□□ -0.48
SKA2-204ENST00000578519 A0A0A6YYK5 440 aaPredicted RBP12.05□□□□□ -0.48
SKA2-204ENST00000578519 RBM47A0AV96 593 aaKnown RBP12.05□□□□□ -0.48
SKA2-204ENST00000578519 MACROD2A1Z1Q3 448 aa12.05□□□□□ -0.48
SKA2-204ENST00000578519 MANSC4A6NHS7 340 aaPredicted RBP12.05□□□□□ -0.48
SKA2-204ENST00000578519 SLC15A5A6NIM6 579 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms