RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 COPB2P35606 906 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 GMPSP49915 693 aaPredicted RBP19.01■□□□□ 0.63
ERBB2-205ENST00000578199 PRPF4BQ13523 1007 aaKnown RBP19.01■□□□□ 0.63
ERBB2-205ENST00000578199 TNFAIP1Q13829 316 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 HLTFQ14527 1009 aaKnown RBP eCLIP19.01■□□□□ 0.63
ERBB2-205ENST00000578199 KIF22Q14807 665 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 DCAF12L1Q5VU92 463 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 TAF3Q5VWG9 929 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 SH3GL2Q99962 352 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 RNF146Q9NTX7 359 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 LYPLA2O95372 231 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 PPATQ06203 517 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 ZNF211Q13398 564 aaPredicted RBP19.01■□□□□ 0.63
ERBB2-205ENST00000578199 EPC2Q52LR7 807 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 DALRD3Q5D0E6 543 aaKnown RBP19.01■□□□□ 0.63
ERBB2-205ENST00000578199 SYCE1Q8N0S2 351 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 PIK3R5Q8WYR1 880 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 BSNDQ8WZ55 320 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 RUFY1Q96T51 708 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 CELF4Q9BZC1 486 aaKnown RBP19.01■□□□□ 0.63
ERBB2-205ENST00000578199 RABEP2Q9H5N1 569 aa19.01■□□□□ 0.63
ERBB2-205ENST00000578199 WDR64B1ANS9 1081 aa19■□□□□ 0.63
ERBB2-205ENST00000578199 SGPL1O95470 568 aa19■□□□□ 0.63
ERBB2-205ENST00000578199 MAPTP10636 758 aaKnown RBP19■□□□□ 0.63
ERBB2-205ENST00000578199 ZNF280AP59817 542 aaPredicted RBP19■□□□□ 0.63
ERBB2-205ENST00000578199 MYBPC2Q14324 1141 aa19■□□□□ 0.63
ERBB2-205ENST00000578199 AADACL2Q6P093 401 aa19■□□□□ 0.63
ERBB2-205ENST00000578199 RPUSD2Q8IZ73 545 aaKnown RBP19■□□□□ 0.63
ERBB2-205ENST00000578199 SH2D3CQ8N5H7 860 aa19■□□□□ 0.63
ERBB2-205ENST00000578199 SEMA4DQ92854 862 aa19■□□□□ 0.63
ERBB2-205ENST00000578199 NEUROG2Q9H2A3 272 aa19■□□□□ 0.63
ERBB2-205ENST00000578199 FGGP02679 453 aa19■□□□□ 0.63
ERBB2-205ENST00000578199 NPTX2P47972 431 aa19■□□□□ 0.63
ERBB2-205ENST00000578199 NCKAP1LP55160 1127 aa19■□□□□ 0.63
ERBB2-205ENST00000578199 IQCKQ8N0W5 287 aa19■□□□□ 0.63
ERBB2-205ENST00000578199 TOPORSQ9NS56 1045 aaPredicted RBP19■□□□□ 0.63
ERBB2-205ENST00000578199 CNOT7Q9UIV1 285 aaKnown RBP19■□□□□ 0.63
ERBB2-205ENST00000578199 ZNF233A6NK53 670 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 DDX3YO15523 660 aaKnown RBP18.99■□□□□ 0.63
ERBB2-205ENST00000578199 FTLP02792 175 aaPredicted RBP18.99■□□□□ 0.63
ERBB2-205ENST00000578199 NR3C2P08235 984 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 CCDC172P0C7W6 258 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 ECHS1P30084 290 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 HMGCS2P54868 508 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 CFAP58Q5T655 872 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 ALS2CLQ60I27 953 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 SNRNP48Q6IEG0 339 aaKnown RBP18.99■□□□□ 0.63
ERBB2-205ENST00000578199 PPM1KQ8N3J5 372 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 RASGEF1CQ8N431 466 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 TMEM161BQ8NDZ6 487 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 GABBR1Q9UBS5 961 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 TBX20Q9UMR3 447 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 USP20Q9Y2K6 914 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 NCANO14594 1321 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 DENND3A2RUS2 1198 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 TMEM110-MUSTN1A8MSY1 372 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 ZNF862O60290 1169 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 CNGA1P29973 690 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 MXI1P50539 228 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 CETN1Q12798 172 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 SNRNP35Q16560 246 aaKnown RBP18.99■□□□□ 0.63
ERBB2-205ENST00000578199 PCDHB18PQ96TA0 734 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 TAF1DQ9H5J8 278 aaPredicted RBP18.99■□□□□ 0.63
ERBB2-205ENST00000578199 TMOD4Q9NZQ9 345 aa18.99■□□□□ 0.63
ERBB2-205ENST00000578199 DOCK5Q9H7D0 1870 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 ANKRD62A6NC57 917 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 TTI1O43156 1089 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 CYP26A1O43174 497 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 ATMINO43313 823 aaPredicted RBP18.98■□□□□ 0.63
ERBB2-205ENST00000578199 OPA1O60313 960 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 RGS20O76081 388 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 JAK3P52333 1124 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 BACE1P56817 501 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 ALCAMQ13740 583 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 NLRX1Q86UT6 975 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 C12orf56Q8IXR9 622 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 CEP170P1Q96L14 293 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 KREMEN1Q96MU8 473 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 MOV10L1Q9BXT6 1211 aaKnown RBP18.98■□□□□ 0.63
ERBB2-205ENST00000578199 CALCAP01258 141 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 FLT3P36888 993 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 NNTQ13423 1086 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 SWSAP1Q6NVH7 229 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 SLC47A2Q86VL8 602 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 VSIG10LQ86VR7 867 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 WRNIP1Q96S55 665 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 ISCUQ9H1K1 167 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 MAP3K20Q9NYL2 800 aaKnown RBP18.98■□□□□ 0.63
ERBB2-205ENST00000578199 LCMT1Q9UIC8 334 aa18.98■□□□□ 0.63
ERBB2-205ENST00000578199 GOLGA8KD6RF30 607 aa18.97■□□□□ 0.63
ERBB2-205ENST00000578199 DAPK3O43293 454 aa18.97■□□□□ 0.63
ERBB2-205ENST00000578199 KRT76Q01546 638 aa18.97■□□□□ 0.63
ERBB2-205ENST00000578199 PPARDQ03181 441 aa18.97■□□□□ 0.63
ERBB2-205ENST00000578199 NOP9Q86U38 636 aaKnown RBP18.97■□□□□ 0.63
ERBB2-205ENST00000578199 ALG3Q92685 438 aa18.97■□□□□ 0.63
ERBB2-205ENST00000578199 KMT5AQ9NQR1 393 aa18.97■□□□□ 0.63
ERBB2-205ENST00000578199 CTTNBP2NLQ9P2B4 639 aa18.97■□□□□ 0.63
ERBB2-205ENST00000578199 PCDHA10Q9Y5I2 948 aa18.97■□□□□ 0.63
ERBB2-205ENST00000578199 PFASO15067 1338 aa18.97■□□□□ 0.63
ERBB2-205ENST00000578199 ATP8B3O60423 1300 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms