RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 EPHA7Q15375 998 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 RNF168Q8IYW5 571 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 FAM193BQ96PV7 902 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 NFKBIZQ9BYH8 718 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 KCNMB3Q9NPA1 279 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 MRPL17Q9NRX2 175 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 DDX25Q9UHL0 483 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 PCDHB2Q9Y5E7 798 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 ZFP37Q9Y6Q3 630 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 ARID2Q68CP9 1835 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 EFEMP2O95967 443 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 SLC11A1P49279 550 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 CLCN4P51793 760 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 NCBP1Q09161 790 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 RUFY3Q7L099 469 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 PHKBQ93100 1093 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 EPS15L1Q9UBC2 864 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 FAN1Q9Y2M0 1017 aa12.57□□□□□ -0.4
SMARCE1-214ENST00000578112 MYO7AQ13402 2215 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 CHMP2AO43633 222 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 NR1I2O75469 434 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 LYPLA2O95372 231 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 BRD1O95696 1058 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 ADH1AP07327 375 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 POU2F2P09086 479 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 AOC1P19801 751 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 BRD2P25440 801 aaKnown RBP12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 TFDP1Q14186 410 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 MXD4Q14582 209 aaPredicted RBP12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 RHPN2Q8IUC4 686 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 CCDC105Q8IYK2 499 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 SLFN12Q8IYM2 578 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 IFT122Q9HBG6 1241 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 WNT16Q9UBV4 365 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 CPLX1O14810 134 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 URODP06132 367 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 ANO5Q75V66 913 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 RTL10Q7L3V2 364 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 TMEM105Q8N8V8 129 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 MFSD1Q9H3U5 465 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 PLEKHA4Q9H4M7 779 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 FNIP2Q9P278 1114 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 VAV3Q9UKW4 847 aa12.56□□□□□ -0.4
SMARCE1-214ENST00000578112 PRR23AA6NEV1 266 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 RBAK-RBAKDNI3L0D1 243 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 ADAMTS3O15072 1205 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 EPCAMP16422 314 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 AGMOQ6ZNB7 445 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 ERMP1Q7Z2K6 904 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 NEK8Q86SG6 692 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 WASF1Q92558 559 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 PHOX2BQ99453 314 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 ZDHHC7Q9NXF8 308 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 GIT1Q9Y2X7 761 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 CYP46A1Q9Y6A2 500 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 MUC3AQ02505 3323 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 BAG4O95429 457 aaKnown RBP12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 TDP2O95551 362 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 KLRC2P26717 231 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 PBX3P40426 434 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 DRP2Q13474 957 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 LETM2Q2VYF4 491 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 UBXN11Q5T124 520 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 RPS6KC1Q96S38 1066 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 COLEC11Q9BWP8 271 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 ZSWIM4Q9H7M6 989 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 ANKEF1Q9NU02 776 aa12.55□□□□□ -0.4
SMARCE1-214ENST00000578112 ITGA4P13612 1032 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 FGFR4P22455 802 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 DSG1Q02413 1049 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 DSC1Q08554 894 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 NOTUMQ6P988 496 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 PDXDC1Q6P996 788 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 NLRP4Q96MN2 994 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 PHF20Q9BVI0 1012 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 WDR6Q9NNW5 1121 aaKnown RBP12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 TSHZ2Q9NRE2 1034 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 CCDC194A0A1B0GVG4 234 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 XRCC6P12956 609 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 CA8P35219 290 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 GLUD2P49448 558 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 TOB2Q14106 344 aaPredicted RBP12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 NPY5RQ15761 445 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 CWF19L1Q69YN2 538 aaKnown RBP12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 PHLDB3Q6NSJ2 640 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 FERMT3Q86UX7 667 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 COLGALT2Q8IYK4 626 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 BCL7CQ8WUZ0 217 aaPredicted RBP12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 NKD2Q969F2 451 aaPredicted RBP12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 CEP170P1Q96L14 293 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 MTRQ99707 1265 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 APOL5Q9BWW9 433 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 VN1R3Q9BXE9 311 aa12.54□□□□□ -0.4
SMARCE1-214ENST00000578112 NT5C1B-RDH14C9J2C7 533 aa12.53□□□□□ -0.4
SMARCE1-214ENST00000578112 ERLIN2O94905 339 aa12.53□□□□□ -0.4
SMARCE1-214ENST00000578112 CNPP09543 421 aaKnown RBP12.53□□□□□ -0.4
SMARCE1-214ENST00000578112 PTENP60484 403 aa12.53□□□□□ -0.4
SMARCE1-214ENST00000578112 LAMTOR4Q0VGL1 99 aa12.53□□□□□ -0.4
SMARCE1-214ENST00000578112 EMC2Q15006 297 aa12.53□□□□□ -0.4
SMARCE1-214ENST00000578112 TMEM173Q86WV6 379 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms