RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 DBR1Q9UK59 544 aaKnown RBP16.15■□□□□ 0.18
SMARCE1-213ENST00000578044 USP15Q9Y4E8 981 aaPredicted RBP16.15■□□□□ 0.18
SMARCE1-213ENST00000578044 FAM205CA6NFA0 338 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 C2orf71A6NGG8 1288 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 GALTP07902 379 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 CTSAP10619 480 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 RARRES1P49788 294 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 TPRNQ4KMQ1 711 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 NOTUMQ6P988 496 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 AGMOQ6ZNB7 445 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 RBM23Q86U06 439 aaKnown RBP16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 PPFIBP1Q86W92 1011 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 FBXO18Q8NFZ0 1043 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 URGCPQ8TCY9 931 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 TMEM143Q96AN5 459 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 ZNF668Q96K58 619 aaPredicted RBP16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 PRIMPOLQ96LW4 560 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 POLR3CQ9BUI4 534 aaPredicted RBP16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 ZBP1Q9H171 429 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 NRDE2Q9H7Z3 1164 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 MINDY3Q9H8M7 445 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 STK24Q9Y6E0 443 aa16.14■□□□□ 0.17
SMARCE1-213ENST00000578044 CACNA1HO95180 2353 aa16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 HIDE1A8MVS5 230 aa16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 JAK2O60674 1132 aa16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 ERLIN2O94905 339 aa16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 RBM25P49756 843 aaKnown RBP16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 CYP4A11Q02928 519 aa16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 ST3GAL1Q11201 340 aa16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 CTTNQ14247 550 aaKnown RBP16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 UBXN11Q5T124 520 aa16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 RNF135Q8IUD6 432 aa16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 RNF169Q8NCN4 708 aa16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 MCPH1Q8NEM0 835 aa16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 EDAQ92838 391 aa16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 RSAD1Q9HA92 442 aa16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 DZANK1Q9NVP4 752 aa16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 BARX2Q9UMQ3 279 aaPredicted RBP16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 MYO10Q9HD67 2058 aa16.13■□□□□ 0.17
SMARCE1-213ENST00000578044 TDRD15B5MCY1 1934 aaKnown RBP16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 PER2O15055 1255 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 SRGAP2CP0DJJ0 459 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 SPATA31C1P0DKV0 1188 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 RPA1P27694 616 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 RNASELQ05823 741 aaKnown RBP16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 CLUL1Q15846 466 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 FAM187BQ17R55 369 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 PLPP4Q5VZY2 271 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 SYCE2Q6PIF2 218 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 HACE1Q8IYU2 909 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 C8orf76Q96K31 380 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 NACC1Q96RE7 527 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 RHOBTB2Q9BYZ6 727 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 SSX2IPQ9Y2D8 614 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 GIT1Q9Y2X7 761 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 PCDHGC5Q9Y5F6 944 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 HCFC2Q9Y5Z7 792 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 WDFY4Q6ZS81 3184 aa16.12■□□□□ 0.17
SMARCE1-213ENST00000578044 TSPAN1O60635 241 aa16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 ZC3H11AO75152 810 aaKnown RBP eCLIP16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 PAPLNO95428 1278 aa16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 SEC24BO95487 1268 aa16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 EFEMP2O95967 443 aa16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 ALDH2P05091 517 aa16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 CENPBP07199 599 aaPredicted RBP16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 IBSPP21815 317 aaPredicted RBP16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 U2AF2P26368 475 aaKnown RBP eCLIP16.11■□□□□ 0.178e-11■■■■□ 22.5
SMARCE1-213ENST00000578044 TXKP42681 527 aa16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 MBTD1Q05BQ5 628 aa16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 PDIA5Q14554 519 aa16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 AMHR2Q16671 573 aa16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 VPS52Q8N1B4 723 aa16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 ERMNQ8TAM6 284 aa16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 CSRNP2Q9H175 543 aa16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 ADAM7Q9H2U9 754 aa16.11■□□□□ 0.17
SMARCE1-213ENST00000578044 A0A1B0GUA9 196 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 LAD1O00515 517 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 ZBTB39O15060 712 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 LILRB3O75022 631 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 CLASP2O75122 1294 aaKnown RBP16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 CXCL14O95715 111 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 PBX3P40426 434 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 TECP42680 631 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 DSC1Q08554 894 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 CAPSQ13938 189 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 CDCA2Q69YH5 1023 aaPredicted RBP16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 CES5AQ6NT32 575 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 CYP26C1Q6V0L0 522 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 CATSPER3Q86XQ3 398 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 KCTD17Q8N5Z5 321 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 SMG8Q8ND04 991 aaKnown RBP16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 LPPQ93052 612 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 FAM122AQ96E09 287 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 MFSD14AQ96MC6 490 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 KIF2CQ99661 725 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 TMEM60Q9H2L4 133 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 USTQ9Y2C2 406 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 NR2E1Q9Y466 385 aa16.1■□□□□ 0.17
SMARCE1-213ENST00000578044 MTCL1Q9Y4B5 1905 aaKnown RBP16.09■□□□□ 0.17
SMARCE1-213ENST00000578044 WNT7AO00755 349 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms