RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 B4GALT5O43286 388 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 IGFBP4P22692 258 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 NPTX2P47972 431 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 EFNA5P52803 228 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 PEX3P56589 373 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 DNM1Q05193 864 aaKnown RBP21.34■■□□□ 1.01
SS18-208ENST00000577751 MCM6Q14566 821 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 MAPK6Q16659 721 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 RNF169Q8NCN4 708 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 RASSF8Q8NHQ8 419 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 GDPD5Q8WTR4 605 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 RSPH1Q8WYR4 309 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 LARP4BQ92615 738 aaKnown RBP21.34■■□□□ 1.01
SS18-208ENST00000577751 NTPCRQ9BSD7 190 aaKnown RBP21.34■■□□□ 1.01
SS18-208ENST00000577751 KIFC3Q9BVG8 833 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 TYW1Q9NV66 732 aaKnown RBP21.34■■□□□ 1.01
SS18-208ENST00000577751 LMCD1Q9NZU5 365 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 DAXXQ9UER7 740 aaPredicted RBP21.34■■□□□ 1.01
SS18-208ENST00000577751 CFAP45Q9UL16 551 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 MTCH2Q9Y6C9 303 aa21.34■■□□□ 1.01
SS18-208ENST00000577751 SFI1A8K8P3 1242 aa21.33■■□□□ 1.01
SS18-208ENST00000577751 CTNNB1P35222 781 aa21.33■■□□□ 1.01
SS18-208ENST00000577751 TXLNAP40222 546 aa21.33■■□□□ 1.01
SS18-208ENST00000577751 NAALADL2Q58DX5 795 aa21.33■■□□□ 1.01
SS18-208ENST00000577751 LRRC55Q6ZSA7 311 aa21.33■■□□□ 1.01
SS18-208ENST00000577751 SMG8Q8ND04 991 aaKnown RBP21.33■■□□□ 1.01
SS18-208ENST00000577751 CNNM3Q8NE01 707 aa21.33■■□□□ 1.01
SS18-208ENST00000577751 MAFAQ8NHW3 353 aaPredicted RBP21.33■■□□□ 1.01
SS18-208ENST00000577751 KCNG4Q8TDN1 519 aa21.33■■□□□ 1.01
SS18-208ENST00000577751 PGBD4Q96DM1 585 aa21.33■■□□□ 1.01
SS18-208ENST00000577751 PLVAPQ9BX97 442 aa21.33■■□□□ 1.01
SS18-208ENST00000577751 EIF2AQ9BY44 585 aaKnown RBP21.33■■□□□ 1.01
SS18-208ENST00000577751 CWH43Q9H720 699 aa21.33■■□□□ 1.01
SS18-208ENST00000577751 ARHGAP28Q9P2N2 729 aa21.33■■□□□ 1.01
SS18-208ENST00000577751 STK17AQ9UEE5 414 aa21.33■■□□□ 1.01
SS18-208ENST00000577751 CNTNAP2Q9UHC6 1331 aa21.32■■□□□ 1
SS18-208ENST00000577751 EYSQ5T1H1 3165 aa21.32■■□□□ 1
SS18-208ENST00000577751 NPHP3-ACAD11A0A0J9YXS1 232 aa21.32■■□□□ 1
SS18-208ENST00000577751 TTLL13PA6NNM8 815 aa21.32■■□□□ 1
SS18-208ENST00000577751 MEIS3P2A8K0S8 358 aa21.32■■□□□ 1
SS18-208ENST00000577751 ACKR2O00590 384 aa21.32■■□□□ 1
SS18-208ENST00000577751 EDN1P05305 212 aa21.32■■□□□ 1
SS18-208ENST00000577751 NCLP19338 710 aaKnown RBP21.32■■□□□ 1
SS18-208ENST00000577751 RAD51AP2Q09MP3 1159 aa21.32■■□□□ 1
SS18-208ENST00000577751 DMP1Q13316 513 aaPredicted RBP21.32■■□□□ 1
SS18-208ENST00000577751 GPM6BQ13491 265 aa21.32■■□□□ 1
SS18-208ENST00000577751 AXDND1Q5T1B0 1012 aaPredicted RBP21.32■■□□□ 1
SS18-208ENST00000577751 RRAGBQ5VZM2 374 aa21.32■■□□□ 1
SS18-208ENST00000577751 AGMOQ6ZNB7 445 aa21.32■■□□□ 1
SS18-208ENST00000577751 GPBP1Q86WP2 473 aa21.32■■□□□ 1
SS18-208ENST00000577751 ABI1Q8IZP0 508 aa21.32■■□□□ 1
SS18-208ENST00000577751 HELQQ8TDG4 1101 aa21.32■■□□□ 1
SS18-208ENST00000577751 LPPQ93052 612 aa21.32■■□□□ 1
SS18-208ENST00000577751 P2RX5Q93086 422 aa21.32■■□□□ 1
SS18-208ENST00000577751 TMEM134Q9H6X4 195 aa21.32■■□□□ 1
SS18-208ENST00000577751 KCNG1Q9UIX4 513 aa21.32■■□□□ 1
SS18-208ENST00000577751 RCOR1Q9UKL0 485 aa21.32■■□□□ 1
SS18-208ENST00000577751 ODF2LQ9ULJ1 636 aa21.32■■□□□ 1
SS18-208ENST00000577751 A0A087X0B3 334 aa21.31■■□□□ 1
SS18-208ENST00000577751 CCDC169A6NNP5 214 aa21.31■■□□□ 1
SS18-208ENST00000577751 K7ERI5 159 aa21.31■■□□□ 1
SS18-208ENST00000577751 GTPBP6O43824 516 aaPredicted RBP21.31■■□□□ 1
SS18-208ENST00000577751 CUTAO60888 179 aa21.31■■□□□ 1
SS18-208ENST00000577751 OFD1O75665 1012 aa21.31■■□□□ 1
SS18-208ENST00000577751 PRKCBP05771 671 aa21.31■■□□□ 1
SS18-208ENST00000577751 PLS3P13797 630 aa21.31■■□□□ 1
SS18-208ENST00000577751 DHX8Q14562 1220 aaKnown RBP21.31■■□□□ 1
SS18-208ENST00000577751 SLC27A1Q6PCB7 646 aa21.31■■□□□ 1
SS18-208ENST00000577751 SPIRE2Q8WWL2 714 aa21.31■■□□□ 1
SS18-208ENST00000577751 REEP2Q9BRK0 252 aa21.31■■□□□ 1
SS18-208ENST00000577751 C11orf84Q9BUA3 381 aaPredicted RBP21.31■■□□□ 1
SS18-208ENST00000577751 KMT5AQ9NQR1 393 aa21.31■■□□□ 1
SS18-208ENST00000577751 HCSTQ9UBK5 93 aa21.31■■□□□ 1
SS18-208ENST00000577751 RBM19Q9Y4C8 960 aaKnown RBP21.31■■□□□ 1
SS18-208ENST00000577751 IPPQ9Y573 584 aa21.31■■□□□ 1
SS18-208ENST00000577751 CACNB1Q02641 598 aaPredicted RBP21.3■■□□□ 1
SS18-208ENST00000577751 PRPF4BQ13523 1007 aaKnown RBP21.3■■□□□ 1
SS18-208ENST00000577751 GIT2Q14161 759 aa21.3■■□□□ 1
SS18-208ENST00000577751 LONRF3Q496Y0 759 aa21.3■■□□□ 1
SS18-208ENST00000577751 SHC4Q6S5L8 630 aa21.3■■□□□ 1
SS18-208ENST00000577751 CCDC73Q6ZRK6 1079 aa21.3■■□□□ 1
SS18-208ENST00000577751 CDR2LQ86X02 465 aaPredicted RBP21.3■■□□□ 1
SS18-208ENST00000577751 LRRC43Q8N309 656 aa21.3■■□□□ 1
SS18-208ENST00000577751 KCNN1Q92952 543 aa21.3■■□□□ 1
SS18-208ENST00000577751 PRRC2BQ5JSZ5 2229 aaKnown RBP21.3■■□□□ 1
SS18-208ENST00000577751 PHLPP2Q6ZVD8 1323 aa21.29■■□□□ 1
SS18-208ENST00000577751 ZNF131P52739 623 aa21.29■■□□□ 1
SS18-208ENST00000577751 GLB1LQ6UWU2 654 aa21.29■■□□□ 1
SS18-208ENST00000577751 TAS1R3Q7RTX0 852 aa21.29■■□□□ 1
SS18-208ENST00000577751 MRPL9Q9BYD2 267 aaKnown RBP21.29■■□□□ 1
SS18-208ENST00000577751 RNF39Q9H2S5 420 aa21.29■■□□□ 1
SS18-208ENST00000577751 PDZD7Q9H5P4 517 aa21.29■■□□□ 1
SS18-208ENST00000577751 LARSQ9P2J5 1176 aaKnown RBP21.29■■□□□ 1
SS18-208ENST00000577751 PCDHA7Q9UN72 937 aa21.29■■□□□ 1
SS18-208ENST00000577751 PLAGL2Q9UPG8 496 aa21.29■■□□□ 1
SS18-208ENST00000577751 USP20Q9Y2K6 914 aa21.29■■□□□ 1
SS18-208ENST00000577751 TCHHQ07283 1943 aa21.29■■□□□ 1
SS18-208ENST00000577751 N4BP3O15049 544 aa21.28■■□□□ 1
SS18-208ENST00000577751 SLC16A4O15374 487 aa21.28■■□□□ 1
SS18-208ENST00000577751 ITGA4P13612 1032 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms