RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 C4orf48Q5BLP8 95 aa7.86□□□□□ -1.15
CASC3-205ENST00000577605 TTC38Q5R3I4 469 aa7.86□□□□□ -1.15
CASC3-205ENST00000577605 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.86□□□□□ -1.15
CASC3-205ENST00000577605 SLC24A5Q71RS6 500 aa7.86□□□□□ -1.15
CASC3-205ENST00000577605 ANO5Q75V66 913 aa7.86□□□□□ -1.15
CASC3-205ENST00000577605 MAFAQ8NHW3 353 aaPredicted RBP7.86□□□□□ -1.15
CASC3-205ENST00000577605 FAM200AQ8TCP9 573 aa7.86□□□□□ -1.15
CASC3-205ENST00000577605 INTS4Q96HW7 963 aaKnown RBP7.86□□□□□ -1.15
CASC3-205ENST00000577605 CCDC43Q96MW1 224 aaKnown RBP7.86□□□□□ -1.15
CASC3-205ENST00000577605 FAM161BQ96MY7 647 aa7.86□□□□□ -1.15
CASC3-205ENST00000577605 NACC1Q96RE7 527 aa7.86□□□□□ -1.15
CASC3-205ENST00000577605 EIF2AK1Q9BQI3 630 aaKnown RBP7.86□□□□□ -1.15
CASC3-205ENST00000577605 LXNQ9BS40 222 aa7.86□□□□□ -1.15
CASC3-205ENST00000577605 POLR3CQ9BUI4 534 aaPredicted RBP7.86□□□□□ -1.15
CASC3-205ENST00000577605 ADAMTS10Q9H324 1103 aa7.86□□□□□ -1.15
CASC3-205ENST00000577605 DHX33Q9H6R0 707 aaKnown RBP7.86□□□□□ -1.15
CASC3-205ENST00000577605 SUGCTQ9HAC7 445 aa7.86□□□□□ -1.15
CASC3-205ENST00000577605 ERVK-5Q9HDB9 667 aa7.86□□□□□ -1.15
CASC3-205ENST00000577605 DACT1Q9NYF0 836 aa7.86□□□□□ -1.15
CASC3-205ENST00000577605 LRFN2Q9ULH4 789 aa7.86□□□□□ -1.15
CASC3-205ENST00000577605 BAZ2BQ9UIF8 2168 aaKnown RBP7.86□□□□□ -1.15
CASC3-205ENST00000577605 LINC01553A4QN01 128 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 SLC26A4O43511 780 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 DGKIO75912 1065 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 EOMESO95936 686 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 RECKO95980 971 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 DARSP14868 501 aaKnown RBP7.85□□□□□ -1.15
CASC3-205ENST00000577605 SFPQP23246 707 aaKnown RBP eCLIP7.85□□□□□ -1.15
CASC3-205ENST00000577605 RPA1P27694 616 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 GJB2P29033 226 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 SARSP49591 514 aaKnown RBP7.85□□□□□ -1.15
CASC3-205ENST00000577605 GPC3P51654 580 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 CLCN3P51790 818 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 POLGP54098 1239 aaPredicted RBP7.85□□□□□ -1.15
CASC3-205ENST00000577605 NLRP11P59045 1033 aaKnown RBP7.85□□□□□ -1.15
CASC3-205ENST00000577605 FAM189BP81408 668 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 GUCY1B3Q02153 619 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 NR1H3Q13133 447 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 TFDP1Q14186 410 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 NR6A1Q15406 480 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 UGCGQ16739 394 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 PTPROQ16827 1216 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 CRTC2Q53ET0 693 aaPredicted RBP7.85□□□□□ -1.15
CASC3-205ENST00000577605 LARP1BQ659C4 914 aaKnown RBP7.85□□□□□ -1.15
CASC3-205ENST00000577605 ARL6IP4Q66PJ3 421 aaKnown RBP7.85□□□□□ -1.15
CASC3-205ENST00000577605 BRAPQ7Z569 592 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 SRGAP1Q7Z6B7 1085 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 BPHLQ86WA6 291 aaPredicted RBP7.85□□□□□ -1.15
CASC3-205ENST00000577605 TPH2Q8IWU9 490 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 CMTR2Q8IYT2 770 aaKnown RBP7.85□□□□□ -1.15
CASC3-205ENST00000577605 FIBCD1Q8N539 461 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 ARMC2Q8NEN0 867 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 FAM174AQ8TBP5 190 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 PSPC1Q8WXF1 523 aaKnown RBP7.85□□□□□ -1.15
CASC3-205ENST00000577605 MYLIPQ8WY64 445 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 DYDC2Q96IM9 177 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 SCLT1Q96NL6 688 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 UIMC1Q96RL1 719 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 CEP89Q96ST8 783 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 PLVAPQ9BX97 442 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 LMAN2LQ9H0V9 348 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 PRDM12Q9H4Q4 367 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 AGO3Q9H9G7 860 aaKnown RBP7.85□□□□□ -1.15
CASC3-205ENST00000577605 TMEM161AQ9NX61 479 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 SUCLA2Q9P2R7 463 aaPredicted RBP7.85□□□□□ -1.15
CASC3-205ENST00000577605 KCNG1Q9UIX4 513 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 DBR1Q9UK59 544 aaKnown RBP7.85□□□□□ -1.15
CASC3-205ENST00000577605 ST3GAL5Q9UNP4 418 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 GINS2Q9Y248 185 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 NOC2LQ9Y3T9 749 aaKnown RBP7.85□□□□□ -1.15
CASC3-205ENST00000577605 PCDHB7Q9Y5E2 793 aa7.85□□□□□ -1.15
CASC3-205ENST00000577605 COL4A6Q14031 1691 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 C5orf67F2Z3F1 127 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 NCK2O43639 380 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 VTNP04004 478 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 MYOGP15173 224 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 ATP2B1P20020 1258 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 AXLP30530 894 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 TECP42680 631 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 RAB27AP51159 221 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 TMEM62Q0P6H9 643 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 ZNF174Q15697 407 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 KIZQ2M2Z5 673 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 TCTN1Q2MV58 587 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 XKR9Q5GH70 373 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 MCTP1Q6DN14 999 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 DTHD1Q6ZMT9 781 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 TRMT1LQ7Z2T5 733 aaKnown RBP7.84□□□□□ -1.15
CASC3-205ENST00000577605 LRRC71Q8N4P6 559 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 SLC17A8Q8NDX2 589 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 CNNM3Q8NE01 707 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 MCPH1Q8NEM0 835 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 C1orf216Q8TAB5 229 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 GJA10Q969M2 543 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 SNX21Q969T3 373 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 ZNF689Q96CS4 500 aaPredicted RBP7.84□□□□□ -1.15
CASC3-205ENST00000577605 OSMRQ99650 979 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 ADAM2Q99965 735 aa7.84□□□□□ -1.15
CASC3-205ENST00000577605 C11orf84Q9BUA3 381 aaPredicted RBP7.84□□□□□ -1.15
CASC3-205ENST00000577605 NFKBIZQ9BYH8 718 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms