RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 CMASQ8NFW8 434 aaPredicted RBP13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 GJA10Q969M2 543 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 JAKMIP1Q96N16 626 aaKnown RBP13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 SH2D3AQ9BRG2 576 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 MAN1C1Q9NR34 630 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 COL4A3BPQ9Y5P4 624 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 GVINP1Q7Z2Y8 2422 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 DCHS1Q96JQ0 3298 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 CYP3A7-CYP3A51PA0A087WV96 503 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 STK25O00506 426 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 C2CD2LO14523 706 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 PI15O43692 258 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 EDIL3O43854 480 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 B4GALT3O60512 393 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 DKC1O60832 514 aaKnown RBP eCLIP13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 CDC45O75419 566 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 DDHD2O94830 711 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 STBD1O95210 358 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 SOD2P04179 222 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 CYP3A7P24462 503 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 GBP2P32456 591 aaPredicted RBP13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 AK2P54819 239 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 NTRK3Q16288 839 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 B3GNT9Q6UX72 402 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 AGMOQ6ZNB7 445 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 ANO5Q75V66 913 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 MRPL10Q7Z7H8 261 aaKnown RBP13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 TRIM22Q8IYM9 498 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 FBXL16Q8N461 479 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 RPS6KC1Q96S38 1066 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 RHOBTB2Q9BYZ6 727 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 SEMA4AQ9H3S1 761 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 IFT122Q9HBG6 1241 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 UBN1Q9NPG3 1134 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 WNT16Q9UBV4 365 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 PCDHA4Q9UN74 947 aa13.04□□□□□ -0.32
CTDNEP1-212ENST00000576613 CCDC195A0A1B0GUA6 201 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 NRP1O14786 923 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 LILRB3O75022 631 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 TDP2O95551 362 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 GLUD1P00367 558 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 POMCP01189 267 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 CFHP08603 1231 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 GLUD2P49448 558 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 PLA2G4FQ68DD2 849 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 MOXD1Q6UVY6 613 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 SRGAP1Q7Z6B7 1085 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 CNNM3Q8NE01 707 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 ETNPPLQ8TBG4 499 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 FEZF2Q8TBJ5 459 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 KCNG4Q8TDN1 519 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 PSPC1Q8WXF1 523 aaKnown RBP13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 NXPE3Q969Y0 559 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 HERC2P3Q9BVR0 1158 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 WDR6Q9NNW5 1121 aaKnown RBP13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 PPME1Q9Y570 386 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 CLUHO75153 1309 aa13.03□□□□□ -0.32
CTDNEP1-212ENST00000576613 CACNA1AO00555 2505 aa13.02□□□□□ -0.32
CTDNEP1-212ENST00000576613 INPPL1O15357 1258 aa13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 NARSO43776 548 aaKnown RBP13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 GAS2O43903 313 aaKnown RBP13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 NR1I2O75469 434 aa13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 ERLIN2O94905 339 aa13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 SRGAP2CP0DJJ0 459 aa13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 NCLP19338 710 aaKnown RBP13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 RPS6KB1P23443 525 aa13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 RFC5P40937 340 aa13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 QARSP47897 775 aaKnown RBP13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 PRPF31Q8WWY3 499 aaKnown RBP13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 AGXT2Q9BYV1 514 aa13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 EPS15L1Q9UBC2 864 aa13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 DDX25Q9UHL0 483 aaKnown RBP13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 PRG3Q9Y2Y8 225 aaPredicted RBP13.02□□□□□ -0.33
CTDNEP1-212ENST00000576613 TEX28O15482 410 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 N4BP1O75113 896 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 LMNAP02545 664 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 SRFP11831 508 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 ITGA4P13612 1032 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 PSMA5P28066 241 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 OR1G1P47890 313 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 AFF1P51825 1210 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 CCT2P78371 535 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 SSRP1Q08945 709 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 NCBP1Q09161 790 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 LAMTOR4Q0VGL1 99 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 PPP2R5CQ13362 524 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 PCBP1Q15365 356 aaKnown RBP eCLIP13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 GALNT17Q6IS24 598 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 ZC3H14Q6PJT7 736 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 BLIDQ8IZY5 108 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 FAM177A1Q8N128 213 aaPredicted RBP13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 HDAC7Q8WUI4 952 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 TCP11Q8WWU5 503 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 SMG7Q92540 1137 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 KCNB2Q92953 911 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 CEP170P1Q96L14 293 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 MBOAT7Q96N66 472 aa13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 SLKQ9H2G2 1235 aaPredicted RBP13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 DHX33Q9H6R0 707 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-212ENST00000576613 PIDD1Q9HB75 910 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms