RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 SUCLA2Q9P2R7 463 aaPredicted RBP11.21□□□□□ -0.61
CALCOCO2-227ENST00000575560 FAN1Q9Y2M0 1017 aa11.21□□□□□ -0.61
CALCOCO2-227ENST00000575560 PCDHB2Q9Y5E7 798 aa11.21□□□□□ -0.61
CALCOCO2-227ENST00000575560 WDR81Q562E7 1941 aa11.21□□□□□ -0.62
CALCOCO2-227ENST00000575560 MED19A0JLT2 244 aaPredicted RBP11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 SPDYE4A6NLX3 237 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 STK25O00506 426 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 NRP1O14786 923 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 SOD2P04179 222 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 SSBP05455 408 aaKnown RBP eCLIP11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 SRFP11831 508 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 HOXA11P31270 313 aaPredicted RBP11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 NONOQ15233 471 aaKnown RBP eCLIP11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 Q4G0T1 1027 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 PHLDB3Q6NSJ2 640 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 ANO5Q75V66 913 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 CATSPER4Q7RTX7 472 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 RNF168Q8IYW5 571 aaPredicted RBP11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 URGCPQ8TCY9 931 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 KCNG4Q8TDN1 519 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 RPS6KC1Q96S38 1066 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 MYADMQ96S97 322 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 MAN1C1Q9NR34 630 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 SEPT9Q9UHD8 586 aaPredicted RBP11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 R4GN57 208 aa11.2□□□□□ -0.62
CALCOCO2-227ENST00000575560 CNTNAP2Q9UHC6 1331 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 CYP3A7-CYP3A51PA0A087WV96 503 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 TEX28O15482 410 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 C1RP00736 705 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 HMGB1P09429 215 aaKnown RBP11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 CYP3A7P24462 503 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 GBP2P32456 591 aaPredicted RBP11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 NTRK3Q16288 839 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 UBXN11Q5T124 520 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 KIAA0319Q5VV43 1072 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 POTEGQ6S5H5 508 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 MIER3Q7Z3K6 550 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 KIAA2013Q8IYS2 634 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 HDAC7Q8WUI4 952 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 STAMQ92783 540 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 ZNF707Q96C28 371 aaPredicted RBP11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 NLRP4Q96MN2 994 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 TBC1D17Q9HA65 648 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 RSAD1Q9HA92 442 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 RXFP1Q9HBX9 757 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 MARCH5Q9NX47 278 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 DPP7Q9UHL4 492 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 SSX2IPQ9Y2D8 614 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 C2orf16Q68DN1 1984 aa11.19□□□□□ -0.62
CALCOCO2-227ENST00000575560 NID2Q14112 1375 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 OTOGLQ3ZCN5 2332 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 CLUHO75153 1309 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 DDX11L8A8MPP1 907 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 ANHXE9PGG2 379 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 C2CD2LO14523 706 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 INPPL1O15357 1258 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 RFPL2O75678 378 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 POMCP01189 267 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 URODP06132 367 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 ADH1AP07327 375 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 DCNP07585 359 aaKnown RBP11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 SP9P0CG40 484 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 LAMP2P13473 410 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 AK2P54819 239 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 DSG1Q02413 1049 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 KRT32Q14532 448 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 PUM1Q14671 1186 aaKnown RBP eCLIP11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 DGLUCYQ7Z3D6 616 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 C1orf210Q8IVY1 113 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 COLGALT2Q8IYK4 626 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 GPR152Q8TDT2 470 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 TBCKQ8TEA7 893 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 RIN2Q8WYP3 895 aaPredicted RBP11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 PHKBQ93100 1093 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 MBOAT7Q96N66 472 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 FAM193BQ96PV7 902 aaPredicted RBP11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 JPH2Q9BR39 696 aaPredicted RBP11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 HERC2P3Q9BVR0 1158 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 MINDY3Q9H8M7 445 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 CHST7Q9NS84 486 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 DLL3Q9NYJ7 618 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 NAP1L2Q9ULW6 460 aaPredicted RBP11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 CA14Q9ULX7 337 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 SIT1Q9Y3P8 196 aa11.18□□□□□ -0.62
CALCOCO2-227ENST00000575560 NCOR2Q9Y618 2525 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 CEP250Q9BV73 2442 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 GLUD1P00367 558 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 GLULP15104 373 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 NCLP19338 710 aaKnown RBP11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 PSMC5P62195 406 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 DSC1Q08554 894 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 SPECC1Q5M775 1068 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 LILRA6Q6PI73 481 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 ELMSAN1Q6PJG2 1045 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 Q6ZUG5 572 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 SRGAP1Q7Z6B7 1085 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 GPR65Q8IYL9 337 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 FBXL16Q8N461 479 aa11.17□□□□□ -0.62
CALCOCO2-227ENST00000575560 ZNF579Q8NAF0 562 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms