RNA–Protein interactions for RNA: ENST00000575515.1

NDC80-204, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 5

Gene NDC80, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-204ENST00000575515 DSC3Q14574 896 aa11.21□□□□□ -0.61
NDC80-204ENST00000575515 SF3A1Q15459 793 aaKnown RBP11.21□□□□□ -0.61
NDC80-204ENST00000575515 CCDC183Q5T5S1 534 aa11.21□□□□□ -0.61
NDC80-204ENST00000575515 KIAA0319Q5VV43 1072 aa11.21□□□□□ -0.61
NDC80-204ENST00000575515 GPR149Q86SP6 731 aa11.21□□□□□ -0.61
NDC80-204ENST00000575515 ECHDC2Q86YB7 292 aa11.21□□□□□ -0.61
NDC80-204ENST00000575515 METTL13Q8N6R0 699 aa11.21□□□□□ -0.61
NDC80-204ENST00000575515 HELQQ8TDG4 1101 aa11.21□□□□□ -0.61
NDC80-204ENST00000575515 USP28Q96RU2 1077 aa11.21□□□□□ -0.61
NDC80-204ENST00000575515 LZTS2Q9BRK4 669 aa11.21□□□□□ -0.61
NDC80-204ENST00000575515 MRPL9Q9BYD2 267 aaKnown RBP11.21□□□□□ -0.61
NDC80-204ENST00000575515 ZBP1Q9H171 429 aa11.21□□□□□ -0.61
NDC80-204ENST00000575515 TMEM63CQ9P1W3 806 aa11.21□□□□□ -0.61
NDC80-204ENST00000575515 CDV3Q9UKY7 258 aaKnown RBP11.21□□□□□ -0.61
NDC80-204ENST00000575515 V9GY48 417 aaPredicted RBP11.21□□□□□ -0.61
NDC80-204ENST00000575515 RALGAPA1Q6GYQ0 2036 aa11.21□□□□□ -0.62
NDC80-204ENST00000575515 MTCL1Q9Y4B5 1905 aaKnown RBP11.21□□□□□ -0.62
NDC80-204ENST00000575515 COL1A2P08123 1366 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 HBP1O60381 514 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 LETM1O95202 739 aaPredicted RBP11.2□□□□□ -0.62
NDC80-204ENST00000575515 YEATS4O95619 227 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 SLC26A2P50443 739 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 ZNF445P59923 1031 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 UBE2SQ16763 222 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 LETM2Q2VYF4 491 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 CLLU1OSQ5K130 101 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 FAM160B1Q5W0V3 765 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 PPFIBP1Q86W92 1011 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 C1orf210Q8IVY1 113 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 CKAP2LQ8IYA6 745 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 SRBD1Q8N5C6 995 aaKnown RBP11.2□□□□□ -0.62
NDC80-204ENST00000575515 SLC22A17Q8WUG5 538 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 RSAD2Q8WXG1 361 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 PSTPIP2Q9H939 334 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 KCNH7Q9NS40 1196 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 RCOR1Q9UKL0 485 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 KCNJ14Q9UNX9 436 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 SIT1Q9Y3P8 196 aa11.2□□□□□ -0.62
NDC80-204ENST00000575515 NFASCO94856 1347 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 DDX39AO00148 427 aaKnown RBP11.19□□□□□ -0.62
NDC80-204ENST00000575515 CTSAP10619 480 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 SRFP11831 508 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 KRT2P35908 639 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 ME1P48163 572 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 POLGP54098 1239 aaPredicted RBP11.19□□□□□ -0.62
NDC80-204ENST00000575515 ATXN1P54253 815 aaKnown RBP11.19□□□□□ -0.62
NDC80-204ENST00000575515 FUT2Q10981 343 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 ZNF484Q5JVG2 852 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 VARS2Q5ST30 1063 aaKnown RBP11.19□□□□□ -0.62
NDC80-204ENST00000575515 PDXDC2PQ6P474 469 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 TRMT1LQ7Z2T5 733 aaKnown RBP11.19□□□□□ -0.62
NDC80-204ENST00000575515 TMEM173Q86WV6 379 aaPredicted RBP11.19□□□□□ -0.62
NDC80-204ENST00000575515 DIS3L2Q8IYB7 885 aaKnown RBP11.19□□□□□ -0.62
NDC80-204ENST00000575515 SUMF1Q8NBK3 374 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 SECISBP2LQ93073 1101 aaKnown RBP11.19□□□□□ -0.62
NDC80-204ENST00000575515 SCLT1Q96NL6 688 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 SPZ1Q9BXG8 430 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 FOXP1Q9H334 677 aaPredicted RBP11.19□□□□□ -0.62
NDC80-204ENST00000575515 ARHGEF3Q9NR81 526 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 VPS54Q9P1Q0 977 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 AKT3Q9Y243 479 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 IRAK3Q9Y616 596 aa11.19□□□□□ -0.62
NDC80-204ENST00000575515 hCG_1642624A0A1W2PR95 340 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 SYCE3A1L190 88 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 SSBP05455 408 aaKnown RBP eCLIP11.18□□□□□ -0.62
NDC80-204ENST00000575515 U2AF2P26368 475 aaKnown RBP eCLIP11.18□□□□□ -0.62
NDC80-204ENST00000575515 KLRC2P26717 231 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 NLRP5P59047 1200 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 LMNB2Q03252 620 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 PTPN14Q15678 1187 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 PFKFB3Q16875 520 aaPredicted RBP11.18□□□□□ -0.62
NDC80-204ENST00000575515 C15orf39Q6ZRI6 1047 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 CCDC73Q6ZRK6 1079 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 DDX53Q86TM3 631 aaKnown RBP11.18□□□□□ -0.62
NDC80-204ENST00000575515 NOSTRINQ8IVI9 506 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 GPR161Q8N6U8 529 aaKnown RBP11.18□□□□□ -0.62
NDC80-204ENST00000575515 GPR152Q8TDT2 470 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 STAMQ92783 540 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 MAP7D2Q96T17 732 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 MXRA8Q9BRK3 442 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 EMILIN2Q9BXX0 1053 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 ZNF302Q9NR11 478 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 DDX19AQ9NUU7 478 aaKnown RBP11.18□□□□□ -0.62
NDC80-204ENST00000575515 PCDHA6Q9UN73 950 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 PCDHA8Q9Y5H6 950 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 CLIC4Q9Y696 253 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 BAHCC1Q9P281 2608 aa11.18□□□□□ -0.62
NDC80-204ENST00000575515 DCDC2BA2VCK2 349 aa11.17□□□□□ -0.62
NDC80-204ENST00000575515 CARNS1A5YM72 827 aa11.17□□□□□ -0.62
NDC80-204ENST00000575515 POTEMA6NI47 508 aa11.17□□□□□ -0.62
NDC80-204ENST00000575515 PRR5-ARHGAP8B1AHC4 643 aa11.17□□□□□ -0.62
NDC80-204ENST00000575515 BTBD18B2RXH4 712 aa11.17□□□□□ -0.62
NDC80-204ENST00000575515 SPTLC1O15269 473 aa11.17□□□□□ -0.62
NDC80-204ENST00000575515 SPTLC2O15270 562 aa11.17□□□□□ -0.62
NDC80-204ENST00000575515 N4BP1O75113 896 aaKnown RBP11.17□□□□□ -0.62
NDC80-204ENST00000575515 GPR32O75388 356 aa11.17□□□□□ -0.62
NDC80-204ENST00000575515 C22orf31O95567 290 aa11.17□□□□□ -0.62
NDC80-204ENST00000575515 NASPP49321 788 aaPredicted RBP11.17□□□□□ -0.62
NDC80-204ENST00000575515 CLCN3P51790 818 aa11.17□□□□□ -0.62
NDC80-204ENST00000575515 NLRP11P59045 1033 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms