RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 SPTLC2O15270 562 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 HIP1RO75146 1068 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 ARF4P18085 180 aaPredicted RBP14.99□□□□□ -0.01
CIITA-210ENST00000575513 SCP2P22307 547 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 TXLNAP40222 546 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 NPTX2P47972 431 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 DMP1Q13316 513 aaPredicted RBP14.99□□□□□ -0.01
CIITA-210ENST00000575513 STK38Q15208 465 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 SLC27A1Q6PCB7 646 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 GLB1LQ6UWU2 654 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 RNF169Q8NCN4 708 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 RASSF8Q8NHQ8 419 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 GDPD5Q8WTR4 605 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 SPIRE2Q8WWL2 714 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 RAD54LQ92698 747 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 KCNN1Q92952 543 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 EPSTI1Q96J88 318 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 PLIN2Q99541 437 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 TMEM134Q9H6X4 195 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 CWH43Q9H720 699 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 BLOC1S4Q9NUP1 217 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 KANSL3Q9P2N6 904 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 STK17AQ9UEE5 414 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 CFAP45Q9UL16 551 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 ODF2LQ9ULJ1 636 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 PLAGL2Q9UPG8 496 aa14.99□□□□□ -0.01
CIITA-210ENST00000575513 INPPL1O15357 1258 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 OFD1O75665 1012 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 BRD1O95696 1058 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 SSBP05455 408 aaKnown RBP eCLIP14.98□□□□□ -0.01
CIITA-210ENST00000575513 PLS3P13797 630 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 LAG3P18627 525 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 PLCG1P19174 1290 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 IBSPP21815 317 aaPredicted RBP14.98□□□□□ -0.01
CIITA-210ENST00000575513 ANP32AP39687 249 aaKnown RBP14.98□□□□□ -0.01
CIITA-210ENST00000575513 SMTNP53814 917 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 UBE3AQ05086 875 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 MAPK7Q13164 816 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 PRPF4BQ13523 1007 aaKnown RBP14.98□□□□□ -0.01
CIITA-210ENST00000575513 KARSQ15046 597 aaKnown RBP14.98□□□□□ -0.01
CIITA-210ENST00000575513 ARSHQ5FYA8 562 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 LRRC55Q6ZSA7 311 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 HACE1Q8IYU2 909 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 SMG8Q8ND04 991 aaKnown RBP14.98□□□□□ -0.01
CIITA-210ENST00000575513 SYMPKQ92797 1274 aaKnown RBP14.98□□□□□ -0.01
CIITA-210ENST00000575513 CLIC6Q96NY7 704 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 ARHGAP28Q9P2N2 729 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 TFIP11Q9UBB9 837 aaKnown RBP14.98□□□□□ -0.01
CIITA-210ENST00000575513 ZMYM2Q9UBW7 1377 aa14.98□□□□□ -0.01
CIITA-210ENST00000575513 H0YCG3 227 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 K7ERI5 159 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 N4BP3O15049 544 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 PRKCBP05771 671 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 PEX3P56589 373 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 PKP1Q13835 747 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 NOMO2Q5JPE7 1267 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 SPOUT1Q5T280 376 aaKnown RBP14.97□□□□□ -0.01
CIITA-210ENST00000575513 AGMOQ6ZNB7 445 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 CCDC73Q6ZRK6 1079 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 USP49Q70CQ1 688 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 KLHL23Q8NBE8 558 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 HELQQ8TDG4 1101 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 KCNG4Q8TDN1 519 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 LARP4BQ92615 738 aaKnown RBP14.97□□□□□ -0.01
CIITA-210ENST00000575513 CPB2Q96IY4 423 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 TRIM6Q9C030 488 aaPredicted RBP14.97□□□□□ -0.01
CIITA-210ENST00000575513 RSAD1Q9HA92 442 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 POLD4Q9HCU8 107 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 KMT5AQ9NQR1 393 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 LARSQ9P2J5 1176 aaKnown RBP14.97□□□□□ -0.01
CIITA-210ENST00000575513 LZTS1Q9Y250 596 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 GIT1Q9Y2X7 761 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 IPPQ9Y573 584 aa14.97□□□□□ -0.01
CIITA-210ENST00000575513 CCDC169A6NNP5 214 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 B4GALT5O43286 388 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 CUTAO60888 179 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 ITGB1P05556 798 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 ITGA4P13612 1032 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 PPM1AP35813 382 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 ZNF131P52739 623 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 PLCB3Q01970 1234 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 TIGD5Q53EQ6 642 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 SPECC1Q5M775 1068 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 RRAGBQ5VZM2 374 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 APBB1IPQ7Z5R6 666 aaPredicted RBP14.96□□□□□ -0.01
CIITA-210ENST00000575513 GPBP1Q86WP2 473 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 COLGALT1Q8NBJ5 622 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 SPPL3Q8TCT6 385 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 URGCPQ8TCY9 931 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 LRRC15Q8TF66 581 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 LPPQ93052 612 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 EIF2AQ9BY44 585 aaKnown RBP14.96□□□□□ -0.01
CIITA-210ENST00000575513 ATP6V1DQ9Y5K8 247 aa14.96□□□□□ -0.01
CIITA-210ENST00000575513 PRRC2BQ5JSZ5 2229 aaKnown RBP14.95□□□□□ -0.02
CIITA-210ENST00000575513 SFI1A8K8P3 1242 aa14.95□□□□□ -0.02
CIITA-210ENST00000575513 GRM6O15303 877 aa14.95□□□□□ -0.02
CIITA-210ENST00000575513 ABCD1P33897 745 aa14.95□□□□□ -0.02
CIITA-210ENST00000575513 ALDH7A1P49419 539 aaKnown RBP14.95□□□□□ -0.02
CIITA-210ENST00000575513 MCM6Q14566 821 aa14.95□□□□□ -0.02
CIITA-210ENST00000575513 CCDC85BQ15834 202 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms