RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 RSAD1Q9HA92 442 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 PDRG1Q9NUG6 133 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 DNAJB4Q9UDY4 337 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 DBR1Q9UK59 544 aaKnown RBP11.68□□□□□ -0.54
TVP23B-208ENST00000575261 USTQ9Y2C2 406 aa11.68□□□□□ -0.54
TVP23B-208ENST00000575261 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 MARCH6O60337 910 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 CCNT1O60563 726 aaKnown RBP11.67□□□□□ -0.54
TVP23B-208ENST00000575261 BRD1O95696 1058 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 WEE2P0C1S8 567 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 EPCAMP16422 314 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 AVPR2P30518 371 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 YWHABP31946 246 aaKnown RBP11.67□□□□□ -0.54
TVP23B-208ENST00000575261 NUBP1P53384 320 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 SCRN1Q12765 414 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 EMC2Q15006 297 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 PTPN14Q15678 1187 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 ATAT1Q5SQI0 421 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 AGMOQ6ZNB7 445 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 PIK3AP1Q6ZUJ8 805 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 C4orf19Q8IY42 314 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 ZDHHC14Q8IZN3 488 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 PLCD3Q8N3E9 789 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 C12orf76Q8N812 135 aaPredicted RBP11.67□□□□□ -0.54
TVP23B-208ENST00000575261 TCP11Q8WWU5 503 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 PRPF31Q8WWY3 499 aaKnown RBP11.67□□□□□ -0.54
TVP23B-208ENST00000575261 TMEM143Q96AN5 459 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 FAM193BQ96PV7 902 aaPredicted RBP11.67□□□□□ -0.54
TVP23B-208ENST00000575261 TMEM175Q9BSA9 504 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 EMILIN2Q9BXX0 1053 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 SFXN1Q9H9B4 322 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
TVP23B-208ENST00000575261 KANSL3Q9P2N6 904 aa11.67□□□□□ -0.54
TVP23B-208ENST00000575261 WRAP73Q9P2S5 460 aaPredicted RBP11.67□□□□□ -0.54
TVP23B-208ENST00000575261 ZFHX2Q9C0A1 2572 aaPredicted RBP11.66□□□□□ -0.54
TVP23B-208ENST00000575261 B4GALT3O60512 393 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 ERLIN2O94905 339 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 PDGFBP01127 241 aaPredicted RBP11.66□□□□□ -0.54
TVP23B-208ENST00000575261 SRGAP2CP0DJJ0 459 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 LAMTOR4Q0VGL1 99 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 PCBP1Q15365 356 aaKnown RBP eCLIP11.66□□□□□ -0.54
TVP23B-208ENST00000575261 EPHA7Q15375 998 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 NCAPH2Q6IBW4 605 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 CCDC149Q6ZUS6 474 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 OTUD6AQ7L8S5 288 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 MRPL10Q7Z7H8 261 aaKnown RBP11.66□□□□□ -0.54
TVP23B-208ENST00000575261 SLFN12Q8IYM2 578 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 ZNF579Q8NAF0 562 aaKnown RBP11.66□□□□□ -0.54
TVP23B-208ENST00000575261 RNF149Q8NC42 400 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 CNNM3Q8NE01 707 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 SLC22A17Q8WUG5 538 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 MTRQ99707 1265 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 VN1R3Q9BXE9 311 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 ZSWIM4Q9H7M6 989 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 MINDY3Q9H8M7 445 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 UBN1Q9NPG3 1134 aa11.66□□□□□ -0.54
TVP23B-208ENST00000575261 ASAP2O43150 1006 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 DDHD2O94830 711 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 ALDH2P05091 517 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 URODP06132 367 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 ASGR2P07307 311 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 NCLP19338 710 aaKnown RBP11.65□□□□□ -0.54
TVP23B-208ENST00000575261 CLCN4P51793 760 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 CYP4A11Q02928 519 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 UBXN11Q5T124 520 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 NOTUMQ6P988 496 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 TMC5Q6UXY8 1006 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 GPR149Q86SP6 731 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 FERMT3Q86UX7 667 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 ZNF280BQ86YH2 543 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 OXER1Q8TDS5 423 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 HAS1Q92839 578 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 ACSF2Q96CM8 615 aaPredicted RBP11.65□□□□□ -0.54
TVP23B-208ENST00000575261 CCDC51Q96ER9 411 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 BRMS1Q9HCU9 246 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 MRPL17Q9NRX2 175 aaKnown RBP11.65□□□□□ -0.54
TVP23B-208ENST00000575261 FAM86C1Q9NVL1 165 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 RGL1Q9NZL6 768 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 FAN1Q9Y2M0 1017 aa11.65□□□□□ -0.54
TVP23B-208ENST00000575261 C2orf16Q68DN1 1984 aa11.65□□□□□ -0.55
TVP23B-208ENST00000575261 NRP1O14786 923 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 GALR2O43603 387 aaPredicted RBP11.64□□□□□ -0.55
TVP23B-208ENST00000575261 PFKFB2O60825 505 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 BAG4O95429 457 aaKnown RBP11.64□□□□□ -0.55
TVP23B-208ENST00000575261 POMCP01189 267 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 SOD2P04179 222 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 SSBP05455 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
TVP23B-208ENST00000575261 CNPP09543 421 aaKnown RBP11.64□□□□□ -0.55
TVP23B-208ENST00000575261 KLRC2P26717 231 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 AXLP30530 894 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 HOXA11P31270 313 aaPredicted RBP11.64□□□□□ -0.55
TVP23B-208ENST00000575261 KRT2P35908 639 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 AFF1P51825 1210 aaKnown RBP11.64□□□□□ -0.55
TVP23B-208ENST00000575261 SPIRE1Q08AE8 756 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 NCBP1Q09161 790 aaKnown RBP11.64□□□□□ -0.55
TVP23B-208ENST00000575261 CTTNQ14247 550 aaKnown RBP11.64□□□□□ -0.55
TVP23B-208ENST00000575261 MXD4Q14582 209 aaPredicted RBP11.64□□□□□ -0.55
TVP23B-208ENST00000575261 XKR9Q5GH70 373 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 KANK3Q6NY19 840 aa11.64□□□□□ -0.55
TVP23B-208ENST00000575261 ELMSAN1Q6PJG2 1045 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms