RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SRRM1Q8IYB3 904 aaKnown RBP10.29□□□□□ -0.76
CCDC40-212ENST00000574799 FAM81AQ8TBF8 368 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 CCDC77Q9BR77 488 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 SPZ1Q9BXG8 430 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 RNPEPL1Q9HAU8 725 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 MTMR4Q9NYA4 1195 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 PARP2Q9UGN5 583 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 PCDHA4Q9UN74 947 aa10.29□□□□□ -0.76
CCDC40-212ENST00000574799 DDTLA6NHG4 134 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-212ENST00000574799 C6orf229H3BNL8 230 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 KLRC4O43908 158 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 BAG3O95817 575 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 TSPY3P0CV98 308 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 TSPY8P0CW00 308 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 CALB2P22676 271 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 HNRNPH3P31942 346 aaKnown RBP10.28□□□□□ -0.76
CCDC40-212ENST00000574799 GCLCP48506 637 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-212ENST00000574799 INHBEP58166 350 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 KCNMA1Q12791 1236 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 PPP2R5EQ16537 467 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 CHADLQ6NUI6 762 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 ABTB1Q969K4 478 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-212ENST00000574799 MASTLQ96GX5 879 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 DBNDD1Q9H9R9 158 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 MKNK2Q9HBH9 465 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCDC40-212ENST00000574799 KBTBD4Q9NVX7 518 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 OPHN1O60890 802 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 UBTFL6P0CB48 400 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-212ENST00000574799 PLCG2P16885 1265 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 ABL2P42684 1182 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 LRRC63Q05C16 580 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 SEL1L2Q5TEA6 688 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 GALNT15Q8N3T1 639 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 LARP4BQ92615 738 aaKnown RBP10.28□□□□□ -0.76
CCDC40-212ENST00000574799 RUNDC3BQ96NL0 473 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 ZNF317Q96PQ6 595 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-212ENST00000574799 ERP44Q9BS26 406 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 MAGEF1Q9HAY2 307 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 RXFP1Q9HBX9 757 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 ANKRD62A6NC57 917 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 PPFIA2O75334 1257 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 CACNB3P54284 484 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 CACNB1Q02641 598 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-212ENST00000574799 PTK2Q05397 1052 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 CFAP157Q5JU67 520 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 KIAA1755Q5JYT7 1200 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 ARHGEF18Q6ZSZ5 1173 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 HS2ST1Q7LGA3 356 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 PIGWQ7Z7B1 504 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 KLHL23Q8NBE8 558 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 ACTRT1Q8TDG2 376 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 BAP1Q92560 729 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 DDX27Q96GQ7 796 aaKnown RBP10.28□□□□□ -0.76
CCDC40-212ENST00000574799 CCSER1Q9C0I3 900 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 METTL5Q9NRN9 209 aaKnown RBP10.28□□□□□ -0.76
CCDC40-212ENST00000574799 RHBDL2Q9NX52 303 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 SEC63Q9UGP8 760 aaKnown RBP10.28□□□□□ -0.76
CCDC40-212ENST00000574799 MTUS1Q9ULD2 1270 aa10.28□□□□□ -0.76
CCDC40-212ENST00000574799 MAPK13O15264 365 aa10.27□□□□□ -0.76
CCDC40-212ENST00000574799 THAP12O43422 761 aa10.27□□□□□ -0.76
CCDC40-212ENST00000574799 BAG2O95816 211 aa10.27□□□□□ -0.76
CCDC40-212ENST00000574799 ZCCHC18P0CG32 403 aa10.27□□□□□ -0.76
CCDC40-212ENST00000574799 ACTN1P12814 892 aa10.27□□□□□ -0.76
CCDC40-212ENST00000574799 CLK2P49760 499 aaKnown RBP10.27□□□□□ -0.76
CCDC40-212ENST00000574799 IL9RQ01113 521 aa10.27□□□□□ -0.76
CCDC40-212ENST00000574799 ADAM9Q13443 819 aa10.27□□□□□ -0.76
CCDC40-212ENST00000574799 NONOQ15233 471 aaKnown RBP eCLIP10.27□□□□□ -0.76
CCDC40-212ENST00000574799 FAM26FQ5R3K3 315 aa10.27□□□□□ -0.76
CCDC40-212ENST00000574799 ZSCAN29Q8IWY8 852 aaPredicted RBP10.27□□□□□ -0.76
CCDC40-212ENST00000574799 DRAXINQ8NBI3 349 aaPredicted RBP10.27□□□□□ -0.76
CCDC40-212ENST00000574799 FBXO41Q8TF61 875 aa10.27□□□□□ -0.76
CCDC40-212ENST00000574799 STK32AQ8WU08 396 aa10.27□□□□□ -0.76
CCDC40-212ENST00000574799 MMTAG2Q9BU76 263 aaKnown RBP10.27□□□□□ -0.76
CCDC40-212ENST00000574799 EDEM3Q9BZQ6 932 aa10.27□□□□□ -0.76
CCDC40-212ENST00000574799 LRRC27Q9C0I9 530 aa10.27□□□□□ -0.76
CCDC40-212ENST00000574799 MTFR1LQ9H019 292 aa10.27□□□□□ -0.76
CCDC40-212ENST00000574799 SUGT1Q9Y2Z0 365 aa10.27□□□□□ -0.76
CCDC40-212ENST00000574799 PEX5P50542 639 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 ANO7Q6IWH7 933 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 RFX8Q6ZV50 586 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.27□□□□□ -0.77
CCDC40-212ENST00000574799 EIF1ADQ8N9N8 165 aaKnown RBP10.27□□□□□ -0.77
CCDC40-212ENST00000574799 KIAA0895Q8NCT3 520 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 MIPOL1Q8TD10 442 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 SCFD2Q8WU76 684 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 TMOD4Q9NZQ9 345 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 KLRF2D3W0D1 207 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 RAD21O60216 631 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 ATP6V1C1P21283 382 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 MMP13P45452 471 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 MAP7Q14244 749 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 EXOC3L4Q17RC7 722 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 C6orf163Q5TEZ5 329 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 HHIPL2Q6UWX4 724 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 JAMLQ86YT9 394 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 AGGF1Q8N302 714 aaeCLIP10.27□□□□□ -0.77
CCDC40-212ENST00000574799 FITM2Q8N6M3 262 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 PGM2Q96G03 612 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 ZDHHC15Q96MV8 337 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms