RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ADGRA3Q8IWK6 1321 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 A0A0G2JLL6 359 aaPredicted RBP15.24■□□□□ 0.03
VPS33B-208ENST00000574755 HNRNPDLO14979 420 aaKnown RBP15.24■□□□□ 0.03
VPS33B-208ENST00000574755 MCM3P25205 808 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 POLGP54098 1239 aaPredicted RBP15.24■□□□□ 0.03
VPS33B-208ENST00000574755 TTLL12Q14166 644 aaPredicted RBP15.24■□□□□ 0.03
VPS33B-208ENST00000574755 EPC2Q52LR7 807 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 MEI1Q5TIA1 1274 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 CCDC70Q6NSX1 233 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 ZNF572Q7Z3I7 529 aaPredicted RBP15.24■□□□□ 0.03
VPS33B-208ENST00000574755 PRRT2Q7Z6L0 340 aaPredicted RBP15.24■□□□□ 0.03
VPS33B-208ENST00000574755 ERO1BQ86YB8 467 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 ANKRD13AQ8IZ07 590 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 SPATA4Q8NEY3 305 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 LNX1Q8TBB1 728 aaPredicted RBP15.24■□□□□ 0.03
VPS33B-208ENST00000574755 POMGNT1Q8WZA1 660 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 CCDC127Q96BQ5 260 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 POLR3FQ9H1D9 316 aaPredicted RBP15.24■□□□□ 0.03
VPS33B-208ENST00000574755 EHD2Q9NZN4 543 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 PACSIN2Q9UNF0 486 aaPredicted RBP15.24■□□□□ 0.03
VPS33B-208ENST00000574755 TARSL2A2RTX5 802 aaKnown RBP15.24■□□□□ 0.03
VPS33B-208ENST00000574755 NF2P35240 595 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 RTP1P59025 263 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 ITIH3Q06033 890 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 BICD1Q96G01 975 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 TMEM117Q9H0C3 514 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 SMARCAL1Q9NZC9 954 aa15.24■□□□□ 0.03
VPS33B-208ENST00000574755 MAFBQ9Y5Q3 323 aaPredicted RBP15.24■□□□□ 0.03
VPS33B-208ENST00000574755 ATP8B3O60423 1300 aa15.23■□□□□ 0.03
VPS33B-208ENST00000574755 SYNGAP1Q96PV0 1343 aa15.23■□□□□ 0.03
VPS33B-208ENST00000574755 FOXN3O00409 490 aaPredicted RBP15.23■□□□□ 0.03
VPS33B-208ENST00000574755 OATP04181 439 aa15.23■□□□□ 0.03
VPS33B-208ENST00000574755 MATR3P43243 847 aaKnown RBP eCLIP15.23■□□□□ 0.039e-6■■□□□ 12
VPS33B-208ENST00000574755 EMC2Q15006 297 aa15.23■□□□□ 0.03
VPS33B-208ENST00000574755 CFAP221Q4G0U5 840 aa15.23■□□□□ 0.03
VPS33B-208ENST00000574755 MOB2Q70IA6 237 aa15.23■□□□□ 0.03
VPS33B-208ENST00000574755 ARHGEF19Q8IW93 802 aa15.23■□□□□ 0.03
VPS33B-208ENST00000574755 SLC30A5Q8TAD4 765 aa15.23■□□□□ 0.03
VPS33B-208ENST00000574755 ASCC2Q9H1I8 757 aaPredicted RBP15.23■□□□□ 0.03
VPS33B-208ENST00000574755 PRDM10Q9NQV6 1147 aa15.23■□□□□ 0.03
VPS33B-208ENST00000574755 SEPT11Q9NVA2 429 aaKnown RBP15.23■□□□□ 0.03
VPS33B-208ENST00000574755 INTUQ9ULD6 942 aa15.23■□□□□ 0.03
VPS33B-208ENST00000574755 ATG7O95352 703 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 UBA1P22314 1058 aaKnown RBP15.22■□□□□ 0.03
VPS33B-208ENST00000574755 MAP2K1Q02750 393 aaPredicted RBP15.22■□□□□ 0.03
VPS33B-208ENST00000574755 C9orf131Q5VYM1 1079 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 SLC39A4Q6P5W5 647 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 HDXQ7Z353 690 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 MS4A14Q96JA4 679 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 SUGCTQ9HAC7 445 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 ST7Q9NRC1 585 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 SOWAHBA6NEL2 793 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 TMCO5BA8MYB1 307 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 ATP4AP20648 1035 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 BRDTQ58F21 947 aaPredicted RBP15.22■□□□□ 0.03
VPS33B-208ENST00000574755 MMGT1Q8N4V1 131 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 PARD3BQ8TEW8 1205 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 CDCA5Q96FF9 252 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 RNF14Q9UBS8 474 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 L1RE1Q9UN81 338 aa15.22■□□□□ 0.03
VPS33B-208ENST00000574755 SPDYE5A6NIY4 337 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 H0YCG3 227 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 TNFAIP3P21580 790 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 GALCP54803 685 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 KIF22Q14807 665 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 KRT39Q6A163 491 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 EEPD1Q7L9B9 569 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 USP37Q86T82 979 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 OLIG1Q8TAK6 271 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 VTI1AQ96AJ9 217 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 TMEM143Q96AN5 459 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 POP1Q99575 1024 aaKnown RBP15.21■□□□□ 0.03
VPS33B-208ENST00000574755 SYT11Q9BT88 431 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 GOLPH3Q9H4A6 298 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.21■□□□□ 0.032e-11■■■■■ 173.1
VPS33B-208ENST00000574755 ARHGAP28Q9P2N2 729 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 A0A0A6YYK5 440 aaPredicted RBP15.21■□□□□ 0.03
VPS33B-208ENST00000574755 LRRIQ3A6PVS8 624 aaPredicted RBP15.21■□□□□ 0.03
VPS33B-208ENST00000574755 CXCL11O14625 94 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 MAP2K7O14733 419 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 PMM2O15305 246 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 ZMYND10O75800 440 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 FARP2O94887 1054 aaPredicted RBP15.21■□□□□ 0.03
VPS33B-208ENST00000574755 EDNRBP24530 442 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 ABCD1P33897 745 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 GPD1LQ8N335 351 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 PPM1KQ8N3J5 372 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 SLC7A3Q8WY07 619 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 TAF4BQ92750 862 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 FBXL18Q96ME1 805 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 AGTPBP1Q9UPW5 1226 aa15.21■□□□□ 0.03
VPS33B-208ENST00000574755 YBX3P16989 372 aaKnown RBP eCLIP15.2■□□□□ 0.02
VPS33B-208ENST00000574755 USP8P40818 1118 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 SMC1AQ14683 1233 aaKnown RBP15.2■□□□□ 0.02
VPS33B-208ENST00000574755 RPS6KA1Q15418 735 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 MAP9Q49MG5 647 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 DPY19L2Q6NUT2 758 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 TAS1R3Q7RTX0 852 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 LRRC57Q8N9N7 239 aa15.2■□□□□ 0.02
VPS33B-208ENST00000574755 TPCN2Q8NHX9 752 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms