RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 MXI1P50539 228 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 POLGP54098 1239 aaPredicted RBP11.36□□□□□ -0.59
USP43-205ENST00000574408 BRD3Q15059 726 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 SNRNP35Q16560 246 aaKnown RBP11.36□□□□□ -0.59
USP43-205ENST00000574408 C1orf220Q5T0J3 134 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 C10orf76Q5T2E6 689 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 BICD1Q96G01 975 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 TLR10Q9BXR5 811 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.36□□□□□ -0.59
USP43-205ENST00000574408 SYNGAP1Q96PV0 1343 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 DDX3XO00571 662 aaKnown RBP eCLIP11.36□□□□□ -0.59
USP43-205ENST00000574408 ANXA13P27216 316 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 EPHX2P34913 555 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 FAM193AP78312 1265 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 EMC2Q15006 297 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 CREG2Q8IUH2 290 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 LMO3Q8TAP4 145 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 TMEM174Q8WUU8 243 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 POMGNT1Q8WZA1 660 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 RPGRIP1Q96KN7 1286 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 NTPCRQ9BSD7 190 aaKnown RBP11.36□□□□□ -0.59
USP43-205ENST00000574408 PDLIM7Q9NR12 457 aa11.36□□□□□ -0.59
USP43-205ENST00000574408 ATP4AP20648 1035 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 NOP2P46087 812 aaKnown RBP11.35□□□□□ -0.59
USP43-205ENST00000574408 VSNL1P62760 191 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 EAPPQ56P03 285 aaPredicted RBP11.35□□□□□ -0.59
USP43-205ENST00000574408 TMEM143Q96AN5 459 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 UBE2TQ9NPD8 197 aaPredicted RBP11.35□□□□□ -0.59
USP43-205ENST00000574408 RAB21Q9UL25 225 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 MAPK13O15264 365 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 CNMDO75829 334 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 OATP04181 439 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 PGK2P07205 417 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 H2AFZP0C0S5 128 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 C2orf54Q08AI8 447 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 CCDC181Q5TID7 509 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 WDR78Q5VTH9 848 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 SLC39A4Q6P5W5 647 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 H2AFVQ71UI9 128 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 GLYCTKQ8IVS8 523 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 GPR88Q9GZN0 384 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 TMEM117Q9H0C3 514 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 TXNRD2Q9NNW7 524 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 SMARCAL1Q9NZC9 954 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 AGTPBP1Q9UPW5 1226 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 FAM170AA1A519 330 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 FOXN3O00409 490 aaPredicted RBP11.35□□□□□ -0.59
USP43-205ENST00000574408 P4HA2O15460 535 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 PRLRP16471 622 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 EDNRBP24530 442 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 MAP2K1Q02750 393 aaPredicted RBP11.35□□□□□ -0.59
USP43-205ENST00000574408 PPIL2Q13356 520 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 LONRF2Q1L5Z9 754 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 EPC2Q52LR7 807 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 USP50Q70EL3 339 aaPredicted RBP11.35□□□□□ -0.59
USP43-205ENST00000574408 ARHGEF19Q8IW93 802 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 LNX1Q8TBB1 728 aaPredicted RBP11.35□□□□□ -0.59
USP43-205ENST00000574408 OPTNQ96CV9 577 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 SEPT11Q9NVA2 429 aaKnown RBP11.35□□□□□ -0.59
USP43-205ENST00000574408 EHD2Q9NZN4 543 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 PCDHGC5Q9Y5F6 944 aa11.35□□□□□ -0.59
USP43-205ENST00000574408 MAFBQ9Y5Q3 323 aaPredicted RBP11.35□□□□□ -0.59
USP43-205ENST00000574408 GRID2IPA4D2P6 1211 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 TMCO5BA8MYB1 307 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 ERLIN1O75477 346 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 ATG7O95352 703 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 TBC1D8O95759 1140 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 CCDC172P0C7W6 258 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 RFX1P22670 979 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 RTP1P59025 263 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 TSKSQ9UJT2 592 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 PACSIN2Q9UNF0 486 aaPredicted RBP11.34□□□□□ -0.59
USP43-205ENST00000574408 KCNH4Q9UQ05 1017 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 PAPPA2Q9BXP8 1791 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 FARP2O94887 1054 aaPredicted RBP11.34□□□□□ -0.59
USP43-205ENST00000574408 GGPS1O95749 300 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 POP1Q99575 1024 aaKnown RBP11.34□□□□□ -0.59
USP43-205ENST00000574408 GOLPH3Q9H4A6 298 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 TOPORSQ9NS56 1045 aaPredicted RBP11.34□□□□□ -0.59
USP43-205ENST00000574408 NENFQ9UMX5 172 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 USP20Q9Y2K6 914 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 GSTTP1A0A1W2PQM5 241 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 SASH3O75995 380 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 USP8P40818 1118 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 MATR3P43243 847 aaKnown RBP eCLIP11.34□□□□□ -0.59
USP43-205ENST00000574408 NEDD9Q14511 834 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 TERF2Q15554 542 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 TAS1R3Q7RTX0 852 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 PARD3BQ8TEW8 1205 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 KAT5Q92993 513 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 GDAP1L1Q96MZ0 367 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 ABCB6Q9NP58 842 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 ARHGAP28Q9P2N2 729 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 RBPJLQ9UBG7 517 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 LOC285556D6RIA3 1793 aa11.34□□□□□ -0.59
USP43-205ENST00000574408 ARID2Q68CP9 1835 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 A0A0G2JMZ2 1700 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 LRRIQ4A6NIV6 560 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 SLC25A27O95847 323 aa11.33□□□□□ -0.6
USP43-205ENST00000574408 DLATP10515 647 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms