RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 TECP42680 631 aa11.12□□□□□ -0.63
RPA1-206ENST00000573994 PHKA2P46019 1235 aa11.12□□□□□ -0.63
RPA1-206ENST00000573994 LEXMQ3ZCV2 418 aa11.12□□□□□ -0.63
RPA1-206ENST00000573994 NAALADL2Q58DX5 795 aa11.12□□□□□ -0.63
RPA1-206ENST00000573994 MAEAQ7L5Y9 396 aa11.12□□□□□ -0.63
RPA1-206ENST00000573994 FERMT3Q86UX7 667 aa11.12□□□□□ -0.63
RPA1-206ENST00000573994 RNF149Q8NC42 400 aa11.12□□□□□ -0.63
RPA1-206ENST00000573994 PABPC5Q96DU9 382 aaKnown RBP11.12□□□□□ -0.63
RPA1-206ENST00000573994 TMX3Q96JJ7 454 aa11.12□□□□□ -0.63
RPA1-206ENST00000573994 TBC1D32Q96NH3 1257 aa11.12□□□□□ -0.63
RPA1-206ENST00000573994 AAASQ9NRG9 546 aa11.12□□□□□ -0.63
RPA1-206ENST00000573994 AGPAT5Q9NUQ2 364 aa11.12□□□□□ -0.63
RPA1-206ENST00000573994 DACT1Q9NYF0 836 aa11.12□□□□□ -0.63
RPA1-206ENST00000573994 NOL7Q9UMY1 257 aaKnown RBP11.12□□□□□ -0.63
RPA1-206ENST00000573994 INPP5FQ9Y2H2 1132 aa11.12□□□□□ -0.63
RPA1-206ENST00000573994 PCDHB12Q9Y5F1 795 aa11.12□□□□□ -0.63
RPA1-206ENST00000573994 GAS2O43903 313 aaKnown RBP11.11□□□□□ -0.63
RPA1-206ENST00000573994 TBX10O75333 385 aa11.11□□□□□ -0.63
RPA1-206ENST00000573994 SPATA31C1P0DKV0 1188 aa11.11□□□□□ -0.63
RPA1-206ENST00000573994 IL9P15248 144 aa11.11□□□□□ -0.63
RPA1-206ENST00000573994 NRIP1P48552 1158 aa11.11□□□□□ -0.63
RPA1-206ENST00000573994 RARRES1P49788 294 aa11.11□□□□□ -0.63
RPA1-206ENST00000573994 ORC2Q13416 577 aaPredicted RBP11.11□□□□□ -0.63
RPA1-206ENST00000573994 CAPSQ13938 189 aa11.11□□□□□ -0.63
RPA1-206ENST00000573994 PLPP4Q5VZY2 271 aa11.11□□□□□ -0.63
RPA1-206ENST00000573994 PTCRAQ6ISU1 281 aaPredicted RBP11.11□□□□□ -0.63
RPA1-206ENST00000573994 RBM23Q86U06 439 aaKnown RBP11.11□□□□□ -0.63
RPA1-206ENST00000573994 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.11□□□□□ -0.63
RPA1-206ENST00000573994 TCP11Q8WWU5 503 aa11.11□□□□□ -0.63
RPA1-206ENST00000573994 RSPH1Q8WYR4 309 aa11.11□□□□□ -0.63
RPA1-206ENST00000573994 ZNF558Q96NG5 402 aa11.11□□□□□ -0.63
RPA1-206ENST00000573994 INO80BQ9C086 356 aaPredicted RBP11.11□□□□□ -0.63
RPA1-206ENST00000573994 POLR3FQ9H1D9 316 aaPredicted RBP11.11□□□□□ -0.63
RPA1-206ENST00000573994 GPRC5CQ9NQ84 441 aa11.11□□□□□ -0.63
RPA1-206ENST00000573994 CHST12Q9NRB3 414 aa11.11□□□□□ -0.63
RPA1-206ENST00000573994 ANKEF1Q9NU02 776 aa11.11□□□□□ -0.63
RPA1-206ENST00000573994 FAM105AQ9NUU6 356 aa11.11□□□□□ -0.63
RPA1-206ENST00000573994 ARIH1Q9Y4X5 557 aaPredicted RBP11.11□□□□□ -0.63
RPA1-206ENST00000573994 NCOR1O75376 2440 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 ATG2AQ2TAZ0 1938 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 INO80B-WBP1J3KQ70 363 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 MAP3K7O43318 606 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 NCK2O43639 380 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 DGAT1O75907 488 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 GJB2P29033 226 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 LTBRP36941 435 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 TRAPPC10P48553 1259 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 NDUFV1P49821 464 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 TOB1P50616 345 aaPredicted RBP11.1□□□□□ -0.63
RPA1-206ENST00000573994 DLX2Q07687 328 aaPredicted RBP11.1□□□□□ -0.63
RPA1-206ENST00000573994 COL19A1Q14993 1142 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 MCTP1Q6DN14 999 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 KCNT2Q6UVM3 1135 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 SRGAP1Q7Z6B7 1085 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 CATSPER3Q86XQ3 398 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 ERMNQ8TAM6 284 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 MICAL1Q8TDZ2 1067 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 CPB2Q96IY4 423 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 GBP3Q9H0R5 595 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 TUFT1Q9NNX1 390 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 TLR9Q9NR96 1032 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 KIF3AQ9Y496 699 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 PCDHB6Q9Y5E3 794 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 PCDHB2Q9Y5E7 798 aa11.1□□□□□ -0.63
RPA1-206ENST00000573994 ARID2Q68CP9 1835 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 NT5C1B-RDH14C9J2C7 533 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 PER2O15055 1255 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 B4GALT5O43286 388 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 TSPAN1O60635 241 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 ZC3H11AO75152 810 aaKnown RBP eCLIP11.09□□□□□ -0.63
RPA1-206ENST00000573994 ERLIN2O94905 339 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 EOMESO95936 686 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 COL9A1P20849 921 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 GLRA2P23416 452 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 U2AF2P26368 475 aaKnown RBP eCLIP11.09□□□□□ -0.63
RPA1-206ENST00000573994 HOXA11P31270 313 aaPredicted RBP11.09□□□□□ -0.63
RPA1-206ENST00000573994 ARL2P36404 184 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 RAB27AP51159 221 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 PTENP60484 403 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 ERVFC1P60507 584 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 RBM10P98175 930 aaKnown RBP11.09□□□□□ -0.63
RPA1-206ENST00000573994 MBTD1Q05BQ5 628 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 TFDP1Q14186 410 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 MXD4Q14582 209 aaPredicted RBP11.09□□□□□ -0.63
RPA1-206ENST00000573994 CSPP1Q1MSJ5 1256 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 CTC1Q2NKJ3 1217 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 PROX2Q3B8N5 592 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 UBXN11Q5T124 520 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 GLB1LQ6UWU2 654 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 TMEM173Q86WV6 379 aaPredicted RBP11.09□□□□□ -0.63
RPA1-206ENST00000573994 C4orf32Q8N8J7 132 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 PPP2R3CQ969Q6 453 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 POLR3CQ9BUI4 534 aaPredicted RBP11.09□□□□□ -0.63
RPA1-206ENST00000573994 EIF2AQ9BY44 585 aaKnown RBP11.09□□□□□ -0.63
RPA1-206ENST00000573994 MRPL9Q9BYD2 267 aaKnown RBP11.09□□□□□ -0.63
RPA1-206ENST00000573994 ENTPD7Q9NQZ7 604 aa11.09□□□□□ -0.63
RPA1-206ENST00000573994 BARX2Q9UMQ3 279 aaPredicted RBP11.09□□□□□ -0.63
RPA1-206ENST00000573994 TCF20Q9UGU0 1960 aaKnown RBP11.08□□□□□ -0.64
RPA1-206ENST00000573994 FNDC1Q4ZHG4 1894 aaPredicted RBP11.08□□□□□ -0.64
RPA1-206ENST00000573994 ARHGEF35A5YM69 484 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms