RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 SLFN12Q8IYM2 578 aa13.61□□□□□ -0.23
CCDC40-210ENST00000573903 CNNM3Q8NE01 707 aa13.61□□□□□ -0.23
CCDC40-210ENST00000573903 AUTS2Q8WXX7 1259 aa13.61□□□□□ -0.23
CCDC40-210ENST00000573903 ASIC4Q96FT7 647 aa13.61□□□□□ -0.23
CCDC40-210ENST00000573903 CCDC43Q96MW1 224 aaKnown RBP13.61□□□□□ -0.23
CCDC40-210ENST00000573903 DHX33Q9H6R0 707 aaKnown RBP13.61□□□□□ -0.23
CCDC40-210ENST00000573903 IFT122Q9HBG6 1241 aa13.61□□□□□ -0.23
CCDC40-210ENST00000573903 BMP2KQ9NSY1 1161 aaPredicted RBP13.61□□□□□ -0.23
CCDC40-210ENST00000573903 C2CD4DB7Z1M9 353 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 EPCAMP16422 314 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 SLC11A1P49279 550 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 LAMTOR4Q0VGL1 99 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 EMC2Q15006 297 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 ANKRD1Q15327 319 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 XKR9Q5GH70 373 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 IER5LQ5T953 404 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 ELMSAN1Q6PJG2 1045 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 POTEDQ86YR6 584 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 PLCD3Q8N3E9 789 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 RNF149Q8NC42 400 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 PRPF31Q8WWY3 499 aaKnown RBP13.6□□□□□ -0.23
CCDC40-210ENST00000573903 TMEM143Q96AN5 459 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 MTRQ99707 1265 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 TMEM175Q9BSA9 504 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 ZSWIM4Q9H7M6 989 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 SFXN1Q9H9B4 322 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 UBN1Q9NPG3 1134 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 DNAJB4Q9UDY4 337 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 CDH22Q9UJ99 828 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 FAN1Q9Y2M0 1017 aa13.6□□□□□ -0.23
CCDC40-210ENST00000573903 MEIS3P2A8K0S8 358 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 ALDH2P05091 517 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 URODP06132 367 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 WEE2P0C1S8 567 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 KLRC2P26717 231 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 AVPR2P30518 371 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 KRT2P35908 639 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 CYP4A11Q02928 519 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 TFDP1Q14186 410 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 MXD4Q14582 209 aaPredicted RBP13.59□□□□□ -0.23
CCDC40-210ENST00000573903 PCBP1Q15365 356 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCDC40-210ENST00000573903 PTPN14Q15678 1187 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 AGMOQ6ZNB7 445 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 FERMT3Q86UX7 667 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 HACE1Q8IYU2 909 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 C12orf76Q8N812 135 aaPredicted RBP13.59□□□□□ -0.23
CCDC40-210ENST00000573903 ACSF2Q96CM8 615 aaPredicted RBP13.59□□□□□ -0.23
CCDC40-210ENST00000573903 DYDC2Q96IM9 177 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 MRPL17Q9NRX2 175 aaKnown RBP13.59□□□□□ -0.23
CCDC40-210ENST00000573903 ORC3Q9UBD5 711 aaPredicted RBP13.59□□□□□ -0.23
CCDC40-210ENST00000573903 USTQ9Y2C2 406 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 SSX2IPQ9Y2D8 614 aa13.59□□□□□ -0.23
CCDC40-210ENST00000573903 PFKFB2O60825 505 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 NR1I2O75469 434 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 SSBP05455 408 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCDC40-210ENST00000573903 ITGA4P13612 1032 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 NCLP19338 710 aaKnown RBP13.58□□□□□ -0.24
CCDC40-210ENST00000573903 AXLP30530 894 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 NUBP1P53384 320 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 VCPP55072 806 aaKnown RBP13.58□□□□□ -0.24
CCDC40-210ENST00000573903 CTTNQ14247 550 aaKnown RBP13.58□□□□□ -0.24
CCDC40-210ENST00000573903 NOTUMQ6P988 496 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 TMC5Q6UXY8 1006 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 CCDC149Q6ZUS6 474 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 MRPL10Q7Z7H8 261 aaKnown RBP13.58□□□□□ -0.24
CCDC40-210ENST00000573903 ZNF280BQ86YH2 543 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 TPH2Q8IWU9 490 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 ZDHHC14Q8IZN3 488 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 ZNF579Q8NAF0 562 aaKnown RBP13.58□□□□□ -0.24
CCDC40-210ENST00000573903 SLC22A17Q8WUG5 538 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 BCL7CQ8WUZ0 217 aaPredicted RBP13.58□□□□□ -0.24
CCDC40-210ENST00000573903 HAS1Q92839 578 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 CCDC51Q96ER9 411 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 TRIM6Q9C030 488 aaPredicted RBP13.58□□□□□ -0.24
CCDC40-210ENST00000573903 MFSD1Q9H3U5 465 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 RGL1Q9NZL6 768 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 WRAP73Q9P2S5 460 aaPredicted RBP13.58□□□□□ -0.24
CCDC40-210ENST00000573903 DENND4AQ7Z401 1863 aa13.58□□□□□ -0.24
CCDC40-210ENST00000573903 PIEZO1Q92508 2521 aa13.57□□□□□ -0.24
CCDC40-210ENST00000573903 TDRD15B5MCY1 1934 aaKnown RBP13.57□□□□□ -0.24
CCDC40-210ENST00000573903 INO80B-WBP1J3KQ70 363 aa13.57□□□□□ -0.24
CCDC40-210ENST00000573903 NRP1O14786 923 aa13.57□□□□□ -0.24
CCDC40-210ENST00000573903 DDHD2O94830 711 aa13.57□□□□□ -0.24
CCDC40-210ENST00000573903 BRD1O95696 1058 aa13.57□□□□□ -0.24
CCDC40-210ENST00000573903 POMCP01189 267 aa13.57□□□□□ -0.24
CCDC40-210ENST00000573903 TCF15Q12870 199 aa13.57□□□□□ -0.24
CCDC40-210ENST00000573903 C8orf34Q49A92 452 aa13.57□□□□□ -0.24
CCDC40-210ENST00000573903 OXER1Q8TDS5 423 aa13.57□□□□□ -0.24
CCDC40-210ENST00000573903 ATOH1Q92858 354 aaPredicted RBP13.57□□□□□ -0.24
CCDC40-210ENST00000573903 KLHL5Q96PQ7 755 aa13.57□□□□□ -0.24
CCDC40-210ENST00000573903 MINDY3Q9H8M7 445 aa13.57□□□□□ -0.24
CCDC40-210ENST00000573903 DPP7Q9UHL4 492 aa13.57□□□□□ -0.24
CCDC40-210ENST00000573903 TPCN1Q9ULQ1 816 aa13.57□□□□□ -0.24
CCDC40-210ENST00000573903 WDFY4Q6ZS81 3184 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 C2CD2LO14523 706 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 SOD2P04179 222 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 ASGR2P07307 311 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 ADH1AP07327 375 aa13.56□□□□□ -0.24
CCDC40-210ENST00000573903 HOXA11P31270 313 aaPredicted RBP13.56□□□□□ -0.24
CCDC40-210ENST00000573903 OR1G1P47890 313 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms