RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 TBX20Q9UMR3 447 aa10.93□□□□□ -0.66
SMG6-213ENST00000573166 BZW2Q9Y6E2 419 aaKnown RBP10.93□□□□□ -0.66
SMG6-213ENST00000573166 A0A087WZ62 844 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 MRPS9P82933 396 aaKnown RBP10.92□□□□□ -0.66
SMG6-213ENST00000573166 ZBED6P86452 979 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 SNRNP35Q16560 246 aaKnown RBP10.92□□□□□ -0.66
SMG6-213ENST00000573166 KYAT1Q16773 422 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 PPP1R13LQ8WUF5 828 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 SECISBP2LQ93073 1101 aaKnown RBP10.92□□□□□ -0.66
SMG6-213ENST00000573166 OSMRQ99650 979 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 FDXACB1Q9BRP7 624 aaPredicted RBP10.92□□□□□ -0.66
SMG6-213ENST00000573166 SHANK3Q9BYB0 1731 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 WNT7AO00755 349 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 EIF3DO15371 548 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMG6-213ENST00000573166 HLTFQ14527 1009 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMG6-213ENST00000573166 ARID5BQ14865 1188 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 NFRKBQ6P4R8 1299 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 NOTUMQ6P988 496 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 FAM149B1Q96BN6 582 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 MTMR8Q96EF0 704 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 CAPZA3Q96KX2 299 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 HEXIM2Q96MH2 286 aaKnown RBP10.92□□□□□ -0.66
SMG6-213ENST00000573166 BPIFA3Q9BQP9 254 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 MIS12Q9H081 205 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 DNAJC12Q9UKB3 198 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 EPN1Q9Y6I3 576 aaPredicted RBP10.92□□□□□ -0.66
SMG6-213ENST00000573166 BFSP2Q13515 415 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 EDRF1Q3B7T1 1238 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 KCNK18Q7Z418 384 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 VSTM4Q8IW00 320 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 DNAJB3Q8WWF6 145 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 MAML3Q96JK9 1138 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 DDX41Q9UJV9 622 aaKnown RBP10.92□□□□□ -0.66
SMG6-213ENST00000573166 HMGCRP04035 888 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 GUCY2CP25092 1073 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 ITGB3BPQ13352 177 aaPredicted RBP10.92□□□□□ -0.66
SMG6-213ENST00000573166 FRMD5Q7Z6J6 570 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 CEP57Q86XR8 500 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 ETNPPLQ8TBG4 499 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 TNFRSF25Q93038 417 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 PGBD4Q96DM1 585 aa10.92□□□□□ -0.66
SMG6-213ENST00000573166 CWC15Q9P013 229 aaKnown RBP10.92□□□□□ -0.66
SMG6-213ENST00000573166 SOWAHBA6NEL2 793 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 HSDL1Q3SXM5 330 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 DUSP28Q4G0W2 176 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 GLB1LQ6UWU2 654 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 ABRAQ8N0Z2 381 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 FBXL13Q8NEE6 735 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 HVCN1Q96D96 273 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 MAK16Q9BXY0 300 aaKnown RBP10.91□□□□□ -0.66
SMG6-213ENST00000573166 CCDC88AQ3V6T2 1871 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 UBR3Q6ZT12 1888 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 ITGA4P13612 1032 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 CKAP4Q07065 602 aaKnown RBP10.91□□□□□ -0.66
SMG6-213ENST00000573166 LAMTOR4Q0VGL1 99 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 TAF2Q6P1X5 1199 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 NFASCO94856 1347 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 ATP2A1O14983 1001 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 DAPK3O43293 454 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 ELF1P32519 619 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 CDR1P51861 262 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 PRKCZQ05513 592 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 DEFB118Q96PH6 123 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 SENP6Q9GZR1 1112 aaPredicted RBP10.91□□□□□ -0.66
SMG6-213ENST00000573166 BLOC1S4Q9NUP1 217 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 SLC45A1Q9Y2W3 748 aa10.91□□□□□ -0.66
SMG6-213ENST00000573166 A0A087X0B3 334 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 NPTXRO95502 500 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 TUBB4AP04350 444 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 TMEM119Q4V9L6 283 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 RSRC2Q7L4I2 434 aaKnown RBP10.9□□□□□ -0.66
SMG6-213ENST00000573166 LRRC8AQ8IWT6 810 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 ELOA2Q8IYF1 753 aaPredicted RBP10.9□□□□□ -0.66
SMG6-213ENST00000573166 AGPAT3Q9NRZ7 376 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 CTAGE15A4D2H0 777 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 CTAGE8P0CG41 777 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 SLC35G1Q2M3R5 365 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 WDR72Q3MJ13 1102 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 SEZ6Q53EL9 994 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 SEL1L2Q5TEA6 688 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 TMEM270Q6UE05 265 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 PEX26Q7Z412 305 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 CTAGE6Q86UF2 777 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 HOOK3Q86VS8 718 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 CTAGE4Q8IX94 777 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 PPP1R12CQ9BZL4 782 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 AGAP1Q9UPQ3 857 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 PAXBP1Q9Y5B6 917 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 TLL2Q9Y6L7 1015 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 TNRC6CQ9HCJ0 1690 aaKnown RBP10.9□□□□□ -0.66
SMG6-213ENST00000573166 GPR25O00155 361 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 GPR182O15218 404 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 TEX33O43247 280 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 MED7O43513 233 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 LMAN1P49257 510 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 SCYL2Q6P3W7 929 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 GSTA5Q7RTV2 222 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 ZNF720Q7Z2F6 126 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 PSMB7Q99436 277 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 CENPHQ9H3R5 247 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms