RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 FBXL6Q8N531 539 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 RNF169Q8NCN4 708 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 MCPH1Q8NEM0 835 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 TOP1MTQ969P6 601 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 AK8Q96MA6 479 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 POLR3FQ9H1D9 316 aaPredicted RBP8.63□□□□□ -1.03
SMG6-211ENST00000572369 CERS4Q9HA82 394 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 C1orf112Q9NSG2 853 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 DAXXQ9UER7 740 aaPredicted RBP8.63□□□□□ -1.03
SMG6-211ENST00000572369 MUTYHQ9UIF7 546 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 MTUS1Q9ULD2 1270 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 PIN4Q9Y237 131 aaKnown RBP8.63□□□□□ -1.03
SMG6-211ENST00000572369 PCDHB7Q9Y5E2 793 aa8.63□□□□□ -1.03
SMG6-211ENST00000572369 LCHNA4D1U4 455 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 LRRIQ4A6NIV6 560 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 C19orf67A6NJJ6 358 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 INO80B-WBP1J3KQ70 363 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 EYA4O95677 639 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 F13A1P00488 732 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 IRS1P35568 1242 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 SARSP49591 514 aaKnown RBP8.62□□□□□ -1.03
SMG6-211ENST00000572369 BTG3Q14201 252 aaPredicted RBP8.62□□□□□ -1.03
SMG6-211ENST00000572369 DHX8Q14562 1220 aaKnown RBP8.62□□□□□ -1.03
SMG6-211ENST00000572369 ECM1Q16610 540 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 PUS10Q3MIT2 529 aaKnown RBP8.62□□□□□ -1.03
SMG6-211ENST00000572369 TWF2Q6IBS0 349 aaKnown RBP8.62□□□□□ -1.03
SMG6-211ENST00000572369 SLC24A5Q71RS6 500 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 SRGAP1Q7Z6B7 1085 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 RTN4RL1Q86UN2 441 aaPredicted RBP8.62□□□□□ -1.03
SMG6-211ENST00000572369 NPAS4Q8IUM7 802 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 ZBTB8OSQ8IWT0 167 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 FIBCD1Q8N539 461 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 LINC01599Q8WXQ3 324 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 ARNTL2Q8WYA1 636 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 EDAQ92838 391 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 NKD2Q969F2 451 aaPredicted RBP8.62□□□□□ -1.03
SMG6-211ENST00000572369 IFT74Q96LB3 600 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 USP28Q96RU2 1077 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 TMX1Q9H3N1 280 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 XPNPEP1Q9NQW7 623 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 RGS18Q9NS28 235 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 DACT1Q9NYF0 836 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 TFIP11Q9UBB9 837 aaKnown RBP8.62□□□□□ -1.03
SMG6-211ENST00000572369 CCDC39Q9UFE4 941 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 PRKAG3Q9UGI9 489 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 COL4A4P53420 1690 aaPredicted RBP8.62□□□□□ -1.03
SMG6-211ENST00000572369 RALGAPA2Q2PPJ7 1873 aa8.62□□□□□ -1.03
SMG6-211ENST00000572369 MGEA5O60502 916 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 KRT18P05783 430 aaKnown RBP8.61□□□□□ -1.03
SMG6-211ENST00000572369 SKIP12755 728 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 LIG1P18858 919 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 CYP11B2P19099 503 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 NCLP19338 710 aaKnown RBP8.61□□□□□ -1.03
SMG6-211ENST00000572369 VCPP55072 806 aaKnown RBP8.61□□□□□ -1.03
SMG6-211ENST00000572369 HTRA4P83105 476 aaPredicted RBP8.61□□□□□ -1.03
SMG6-211ENST00000572369 TAP1Q03518 808 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 GRB10Q13322 594 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 CAPSQ13938 189 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 PPP2R5AQ15172 486 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 PAN2Q504Q3 1202 aaKnown RBP8.61□□□□□ -1.03
SMG6-211ENST00000572369 SPECC1Q5M775 1068 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 SPOUT1Q5T280 376 aaKnown RBP8.61□□□□□ -1.03
SMG6-211ENST00000572369 TRIM67Q6ZTA4 783 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 ABI1Q8IZP0 508 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 DEPTORQ8TB45 409 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 ASAP3Q8TDY4 903 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 KIFAP3Q92845 792 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 TGS1Q96RS0 853 aaKnown RBP8.61□□□□□ -1.03
SMG6-211ENST00000572369 MMTAG2Q9BU76 263 aaKnown RBP8.61□□□□□ -1.03
SMG6-211ENST00000572369 CSRNP2Q9H175 543 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 IFT122Q9HBG6 1241 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 GPRC5CQ9NQ84 441 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 CHST12Q9NRB3 414 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 TTC3P53804 2025 aa8.61□□□□□ -1.03
SMG6-211ENST00000572369 ADGRA3Q8IWK6 1321 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 FNDC1Q4ZHG4 1894 aaPredicted RBP8.6□□□□□ -1.03
SMG6-211ENST00000572369 LINC01553A4QN01 128 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 CCDC169A6NNP5 214 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 TBKBP1A7MCY6 615 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 C9IYK1 514 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 SPTLC2O15270 562 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 HOXA2O43364 376 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 SLC26A4O43511 780 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 DGKIO75912 1065 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 GLRA2P23416 452 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 ARL2P36404 184 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 GRIN1Q05586 938 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 RAD51AP2Q09MP3 1159 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 SLC39A14Q15043 492 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 KARSQ15046 597 aaKnown RBP8.6□□□□□ -1.03
SMG6-211ENST00000572369 PTPAQ15257 358 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 KCNK18Q7Z418 384 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 ADHFE1Q8IWW8 467 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 KCTD17Q8N5Z5 321 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 KRI1Q8N9T8 703 aaKnown RBP8.6□□□□□ -1.03
SMG6-211ENST00000572369 FBXO22Q8NEZ5 403 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 DRC1Q96MC2 740 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 SAMD11Q96NU1 681 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 PNMA5Q96PV4 448 aa8.6□□□□□ -1.03
SMG6-211ENST00000572369 C2orf40Q9H1Z8 148 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms