RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 ZNF623O75123 536 aa16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 SYT1P21579 422 aa16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 RAB27AP51159 221 aa16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 NOMO2Q5JPE7 1267 aa16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 GLB1LQ6UWU2 654 aa16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 CATSPER4Q7RTX7 472 aa16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 DDX53Q86TM3 631 aaKnown RBP16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 BCL7CQ8WUZ0 217 aaPredicted RBP16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 AUTS2Q8WXX7 1259 aa16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 IGSF21Q96ID5 467 aa16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 JPH2Q9BR39 696 aaPredicted RBP16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 IFT122Q9HBG6 1241 aa16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 CYP26B1Q9NR63 512 aa16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 INPP5FQ9Y2H2 1132 aa16.52■□□□□ 0.24
NPLOC4-207ENST00000572346 CARNS1A5YM72 827 aa16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 OFD1O75665 1012 aa16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 GALTP07902 379 aa16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 CTSAP10619 480 aa16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 ATP2B1P20020 1258 aa16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 AVPR2P30518 371 aa16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 POLGP54098 1239 aaPredicted RBP16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 NPEPPSP55786 919 aa16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 PPP2R5CQ13362 524 aa16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 LETM2Q2VYF4 491 aa16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 RARS2Q5T160 578 aaKnown RBP16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 NEK8Q86SG6 692 aa16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 NAP1L4Q99733 375 aaKnown RBP16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 KCNMB3Q9NPA1 279 aa16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 DNAJB4Q9UDY4 337 aa16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 VAV3Q9UKW4 847 aa16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 NOL7Q9UMY1 257 aaKnown RBP16.51■□□□□ 0.23
NPLOC4-207ENST00000572346 STX6O43752 255 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 B4GALT3O60512 393 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 PDGFBP01127 241 aaPredicted RBP16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 WEE2P0C1S8 567 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 PDIA4P13667 645 aaKnown RBP16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 EPCAMP16422 314 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 MTHFRP42898 656 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 QARSP47897 775 aaKnown RBP16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 RNASELQ05823 741 aaKnown RBP16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 GIT2Q14161 759 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 EARS2Q5JPH6 523 aaKnown RBP16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 KANK3Q6NY19 840 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 NOSTRINQ8IVI9 506 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 C12orf76Q8N812 135 aaPredicted RBP16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 ZNF579Q8NAF0 562 aaKnown RBP16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 TMEM87AQ8NBN3 555 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 KREMEN2Q8NCW0 462 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 SLC7A3Q8WY07 619 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 TNFRSF25Q93038 417 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 RIPOR3Q96MK2 946 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 FAM20AQ96MK3 541 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 GBP3Q9H0R5 595 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 AGPAT5Q9NUQ2 364 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 DZANK1Q9NVP4 752 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 WRAP73Q9P2S5 460 aaPredicted RBP16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 SORCS3Q9UPU3 1222 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 RBM19Q9Y4C8 960 aaKnown RBP16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 PCDHB2Q9Y5E7 798 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 COL4A3BPQ9Y5P4 624 aa16.5■□□□□ 0.23
NPLOC4-207ENST00000572346 FAM205CA6NFA0 338 aa16.49■□□□□ 0.23
NPLOC4-207ENST00000572346 DKC1O60832 514 aaKnown RBP eCLIP16.49■□□□□ 0.232e-25■■■■□ 26.2
NPLOC4-207ENST00000572346 BRD1O95696 1058 aa16.49■□□□□ 0.23
NPLOC4-207ENST00000572346 SLC11A1P49279 550 aa16.49■□□□□ 0.23
NPLOC4-207ENST00000572346 MTMR3Q13615 1198 aa16.49■□□□□ 0.23
NPLOC4-207ENST00000572346 PPP4R3AQ6IN85 833 aa16.49■□□□□ 0.23
NPLOC4-207ENST00000572346 KIAA1841Q6NSI8 718 aa16.49■□□□□ 0.23
NPLOC4-207ENST00000572346 AGMOQ6ZNB7 445 aa16.49■□□□□ 0.23
NPLOC4-207ENST00000572346 ZNF280BQ86YH2 543 aa16.49■□□□□ 0.23
NPLOC4-207ENST00000572346 SLC22A17Q8WUG5 538 aa16.49■□□□□ 0.23
NPLOC4-207ENST00000572346 PGBD4Q96DM1 585 aa16.49■□□□□ 0.23
NPLOC4-207ENST00000572346 CEP170P1Q96L14 293 aa16.49■□□□□ 0.23
NPLOC4-207ENST00000572346 VN1R3Q9BXE9 311 aa16.49■□□□□ 0.23
NPLOC4-207ENST00000572346 DHX33Q9H6R0 707 aaKnown RBP16.49■□□□□ 0.23
NPLOC4-207ENST00000572346 CACNA1HO95180 2353 aa16.49■□□□□ 0.23
NPLOC4-207ENST00000572346 MARCH6O60337 910 aa16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 CCNT1O60563 726 aaKnown RBP16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 P4HBP07237 508 aaKnown RBP16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 GCFC2P16383 781 aaKnown RBP16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 U2AF2P26368 475 aaKnown RBP eCLIP16.48■□□□□ 0.236e-21■■□□□ 11.5
NPLOC4-207ENST00000572346 AFF1P51825 1210 aaKnown RBP16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 PTPN14Q15678 1187 aa16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 ATAT1Q5SQI0 421 aa16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 SRGAP1Q7Z6B7 1085 aa16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 FERMT3Q86UX7 667 aa16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 EXOC8Q8IYI6 725 aa16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 UBALD2Q8IYN6 164 aa16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 PRPF31Q8WWY3 499 aaKnown RBP16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 HAS1Q92839 578 aa16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 TMEM143Q96AN5 459 aa16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 MINDY3Q9H8M7 445 aa16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 PPME1Q9Y570 386 aa16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 MYH15Q9Y2K3 1946 aa16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 DENND4AQ7Z401 1863 aa16.48■□□□□ 0.23
NPLOC4-207ENST00000572346 DDHD2O94830 711 aa16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 SRGAP2CP0DJJ0 459 aa16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 HOXA11P31270 313 aaPredicted RBP16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 RFC5P40937 340 aa16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 UBXN11Q5T124 520 aa16.47■□□□□ 0.23
NPLOC4-207ENST00000572346 MRPL10Q7Z7H8 261 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms