RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 RDM1Q8NG50 284 aa22.28■■□□□ 1.16
CCDC40-206ENST00000572083 RIN2Q8WYP3 895 aaPredicted RBP22.28■■□□□ 1.16
CCDC40-206ENST00000572083 BRF1Q92994 677 aa22.28■■□□□ 1.16
CCDC40-206ENST00000572083 FAM193BQ96PV7 902 aaPredicted RBP22.28■■□□□ 1.16
CCDC40-206ENST00000572083 IFT122Q9HBG6 1241 aa22.28■■□□□ 1.16
CCDC40-206ENST00000572083 STK39Q9UEW8 545 aa22.28■■□□□ 1.16
CCDC40-206ENST00000572083 FAN1Q9Y2M0 1017 aa22.28■■□□□ 1.16
CCDC40-206ENST00000572083 R4GN57 208 aa22.28■■□□□ 1.16
CCDC40-206ENST00000572083 DDX11L8A8MPP1 907 aa22.27■■□□□ 1.16
CCDC40-206ENST00000572083 LMNAP02545 664 aaKnown RBP22.27■■□□□ 1.16
CCDC40-206ENST00000572083 SOD2P04179 222 aa22.27■■□□□ 1.16
CCDC40-206ENST00000572083 URODP06132 367 aa22.27■■□□□ 1.16
CCDC40-206ENST00000572083 USP11P51784 963 aa22.27■■□□□ 1.16
CCDC40-206ENST00000572083 TBCKQ8TEA7 893 aa22.27■■□□□ 1.16
CCDC40-206ENST00000572083 PRG3Q9Y2Y8 225 aaPredicted RBP22.27■■□□□ 1.16
CCDC40-206ENST00000572083 CLUHO75153 1309 aa22.27■■□□□ 1.16
CCDC40-206ENST00000572083 CCDC195A0A1B0GUA6 201 aa22.26■■□□□ 1.15
CCDC40-206ENST00000572083 RFPL2O75678 378 aa22.26■■□□□ 1.15
CCDC40-206ENST00000572083 TDP2O95551 362 aa22.26■■□□□ 1.15
CCDC40-206ENST00000572083 ALDH2P05091 517 aa22.26■■□□□ 1.15
CCDC40-206ENST00000572083 HMGB1P09429 215 aaKnown RBP22.26■■□□□ 1.15
CCDC40-206ENST00000572083 ANO5Q75V66 913 aa22.26■■□□□ 1.15
CCDC40-206ENST00000572083 TAS1R1Q7RTX1 841 aa22.26■■□□□ 1.15
CCDC40-206ENST00000572083 CMASQ8NFW8 434 aaPredicted RBP22.26■■□□□ 1.15
CCDC40-206ENST00000572083 RMDN1Q96DB5 314 aa22.26■■□□□ 1.15
CCDC40-206ENST00000572083 MYADMQ96S97 322 aa22.26■■□□□ 1.15
CCDC40-206ENST00000572083 TMEM175Q9BSA9 504 aa22.26■■□□□ 1.15
CCDC40-206ENST00000572083 SLC26A6Q9BXS9 759 aa22.26■■□□□ 1.15
CCDC40-206ENST00000572083 WDR6Q9NNW5 1121 aaKnown RBP22.26■■□□□ 1.15
CCDC40-206ENST00000572083 MARCH5Q9NX47 278 aa22.26■■□□□ 1.15
CCDC40-206ENST00000572083 WNT16Q9UBV4 365 aa22.26■■□□□ 1.15
CCDC40-206ENST00000572083 INPPL1O15357 1258 aa22.25■■□□□ 1.15
CCDC40-206ENST00000572083 TEX28O15482 410 aa22.25■■□□□ 1.15
CCDC40-206ENST00000572083 ADH1AP07327 375 aa22.25■■□□□ 1.15
CCDC40-206ENST00000572083 Q4G0T1 1027 aa22.25■■□□□ 1.15
CCDC40-206ENST00000572083 SPECC1Q5M775 1068 aa22.25■■□□□ 1.15
CCDC40-206ENST00000572083 B3GNT9Q6UX72 402 aa22.25■■□□□ 1.15
CCDC40-206ENST00000572083 KIAA2013Q8IYS2 634 aa22.25■■□□□ 1.15
CCDC40-206ENST00000572083 STAMQ92783 540 aa22.25■■□□□ 1.15
CCDC40-206ENST00000572083 RPS6KC1Q96S38 1066 aa22.25■■□□□ 1.15
CCDC40-206ENST00000572083 HERC2P3Q9BVR0 1158 aa22.25■■□□□ 1.15
CCDC40-206ENST00000572083 MINDY3Q9H8M7 445 aa22.25■■□□□ 1.15
CCDC40-206ENST00000572083 TBC1D17Q9HA65 648 aa22.25■■□□□ 1.15
CCDC40-206ENST00000572083 COL4A3BPQ9Y5P4 624 aa22.25■■□□□ 1.15
CCDC40-206ENST00000572083 GLUD1P00367 558 aa22.24■■□□□ 1.15
CCDC40-206ENST00000572083 NONOQ15233 471 aaKnown RBP eCLIP22.24■■□□□ 1.15
CCDC40-206ENST00000572083 NTRK3Q16288 839 aa22.24■■□□□ 1.15
CCDC40-206ENST00000572083 UBXN11Q5T124 520 aa22.24■■□□□ 1.15
CCDC40-206ENST00000572083 MRPL10Q7Z7H8 261 aaKnown RBP22.24■■□□□ 1.15
CCDC40-206ENST00000572083 RNF26Q9BY78 433 aaPredicted RBP22.24■■□□□ 1.15
CCDC40-206ENST00000572083 KANSL3Q9P2N6 904 aa22.24■■□□□ 1.15
CCDC40-206ENST00000572083 EPS15L1Q9UBC2 864 aa22.24■■□□□ 1.15
CCDC40-206ENST00000572083 CNTNAP2Q9UHC6 1331 aa22.24■■□□□ 1.15
CCDC40-206ENST00000572083 MED19A0JLT2 244 aaPredicted RBP22.23■■□□□ 1.15
CCDC40-206ENST00000572083 DCNP07585 359 aaKnown RBP22.23■■□□□ 1.15
CCDC40-206ENST00000572083 SPATA31D3P0C874 917 aa22.23■■□□□ 1.15
CCDC40-206ENST00000572083 SRFP11831 508 aa22.23■■□□□ 1.15
CCDC40-206ENST00000572083 OR1G1P47890 313 aa22.23■■□□□ 1.15
CCDC40-206ENST00000572083 NPEPPSP55786 919 aa22.23■■□□□ 1.15
CCDC40-206ENST00000572083 NLRP5P59047 1200 aa22.23■■□□□ 1.15
CCDC40-206ENST00000572083 SPATA31D4Q6ZUB0 917 aa22.23■■□□□ 1.15
CCDC40-206ENST00000572083 SKAP1Q86WV1 359 aa22.23■■□□□ 1.15
CCDC40-206ENST00000572083 SLC44A3Q8N4M1 653 aa22.23■■□□□ 1.15
CCDC40-206ENST00000572083 GPR152Q8TDT2 470 aa22.23■■□□□ 1.15
CCDC40-206ENST00000572083 SMG7Q92540 1137 aaKnown RBP22.23■■□□□ 1.15
CCDC40-206ENST00000572083 HINFPQ9BQA5 517 aa22.23■■□□□ 1.15
CCDC40-206ENST00000572083 JPH2Q9BR39 696 aaPredicted RBP22.23■■□□□ 1.15
CCDC40-206ENST00000572083 BMP2KQ9NSY1 1161 aaPredicted RBP22.23■■□□□ 1.15
CCDC40-206ENST00000572083 F8W810 466 aa22.22■■□□□ 1.15
CCDC40-206ENST00000572083 SRGAP2CP0DJJ0 459 aa22.22■■□□□ 1.15
CCDC40-206ENST00000572083 HOXA11P31270 313 aaPredicted RBP22.22■■□□□ 1.15
CCDC40-206ENST00000572083 GLUD2P49448 558 aa22.22■■□□□ 1.15
CCDC40-206ENST00000572083 ELMSAN1Q6PJG2 1045 aa22.22■■□□□ 1.15
CCDC40-206ENST00000572083 ZNF579Q8NAF0 562 aaKnown RBP22.22■■□□□ 1.15
CCDC40-206ENST00000572083 ST13P5Q8NFI4 369 aaPredicted RBP22.22■■□□□ 1.15
CCDC40-206ENST00000572083 ETNPPLQ8TBG4 499 aa22.22■■□□□ 1.15
CCDC40-206ENST00000572083 TMEM143Q96AN5 459 aa22.22■■□□□ 1.15
CCDC40-206ENST00000572083 ZNF707Q96C28 371 aaPredicted RBP22.22■■□□□ 1.15
CCDC40-206ENST00000572083 JAKMIP1Q96N16 626 aaKnown RBP22.22■■□□□ 1.15
CCDC40-206ENST00000572083 SEMA4AQ9H3S1 761 aa22.22■■□□□ 1.15
CCDC40-206ENST00000572083 DOCK8Q8NF50 2099 aa22.22■■□□□ 1.15
CCDC40-206ENST00000572083 PSMC5P62195 406 aa22.21■■□□□ 1.15
CCDC40-206ENST00000572083 BMP2KLQ5H9B9 411 aa22.21■■□□□ 1.15
CCDC40-206ENST00000572083 GET4Q7L5D6 327 aaPredicted RBP22.21■■□□□ 1.15
CCDC40-206ENST00000572083 DGLUCYQ7Z3D6 616 aa22.21■■□□□ 1.15
CCDC40-206ENST00000572083 COLGALT2Q8IYK4 626 aa22.21■■□□□ 1.15
CCDC40-206ENST00000572083 SMG8Q8ND04 991 aaKnown RBP22.21■■□□□ 1.15
CCDC40-206ENST00000572083 PRPF31Q8WWY3 499 aaKnown RBP22.21■■□□□ 1.15
CCDC40-206ENST00000572083 SLC7A3Q8WY07 619 aa22.21■■□□□ 1.15
CCDC40-206ENST00000572083 B3GALT6Q96L58 329 aa22.21■■□□□ 1.15
CCDC40-206ENST00000572083 NCOA5Q9HCD5 579 aaKnown RBP22.21■■□□□ 1.15
CCDC40-206ENST00000572083 ARHGEF3Q9NR81 526 aa22.21■■□□□ 1.15
CCDC40-206ENST00000572083 DPP7Q9UHL4 492 aa22.21■■□□□ 1.15
CCDC40-206ENST00000572083 SSX2IPQ9Y2D8 614 aa22.21■■□□□ 1.15
CCDC40-206ENST00000572083 CYP3A7-CYP3A51PA0A087WV96 503 aa22.2■■□□□ 1.14
CCDC40-206ENST00000572083 EML1O00423 815 aa22.2■■□□□ 1.14
CCDC40-206ENST00000572083 IFNAR1P17181 557 aa22.2■■□□□ 1.14
CCDC40-206ENST00000572083 NCLP19338 710 aaKnown RBP22.2■■□□□ 1.14
CCDC40-206ENST00000572083 CYP3A7P24462 503 aa22.2■■□□□ 1.14
CCDC40-206ENST00000572083 MLH1P40692 756 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms