RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 POF1BQ8WVV4 589 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 P2RX5Q93086 422 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 EPSTI1Q96J88 318 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 C11orf84Q9BUA3 381 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 CCDC113Q9H0I3 377 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 CSRNP2Q9H175 543 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 FZD8Q9H461 694 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 NRDE2Q9H7Z3 1164 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 BLOC1S4Q9NUP1 217 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 RNF216Q9NWF9 866 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 TFIP11Q9UBB9 837 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 FBXO2Q9UK22 296 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 INPP5FQ9Y2H2 1132 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 RWDD3Q9Y3V2 267 aa11.33□□□□□ -0.6
GTF3C1-213ENST00000571886 HOXA2O43364 376 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 FGF18O76093 207 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 DDHD2O94830 711 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 SSBP05455 408 aaKnown RBP eCLIP11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 PLA2G4BP0C869 781 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 LIG1P18858 919 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 NCLP19338 710 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 AXLP30530 894 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 NAMPTP43490 491 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 PEX3P56589 373 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 ERVFC1P60507 584 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 CACNB1Q02641 598 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 RAD51AP2Q09MP3 1159 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 PTPROQ16827 1216 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 FAM187BQ17R55 369 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 NOMO2Q5JPE7 1267 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 EEF1DP3Q658K8 133 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 KCNT2Q6UVM3 1135 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 PPP4R3CPQ6ZMV5 832 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 TAS1R3Q7RTX0 852 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 TMEM173Q86WV6 379 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 ZNF280BQ86YH2 543 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 ABI1Q8IZP0 508 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 CXCL16Q9H2A7 254 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 TBC1D13Q9NVG8 400 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 THEGQ9P2T0 379 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 DNAJB4Q9UDY4 337 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 IPPQ9Y573 584 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 BRWD1Q9NSI6 2320 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 TRIP11Q15643 1979 aa11.32□□□□□ -0.6
GTF3C1-213ENST00000571886 XIRP2A4UGR9 3374 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 A0A1B0GUA9 196 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 NPTXRO95502 500 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 BMP15O95972 392 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 PRKCBP05771 671 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 SKIP12755 728 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 LAG3P18627 525 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 PLCG1P19174 1290 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 AKAP5P24588 427 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 LONP1P36776 959 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 UBA7P41226 1012 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 NPTX2P47972 431 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 RAB27AP51159 221 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 KCNQ1P51787 676 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 BCAR1P56945 870 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 HYAL1Q12794 435 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 DHX8Q14562 1220 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 MCM6Q14566 821 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 FOXD4L6Q3SYB3 417 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 NAALADL2Q58DX5 795 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 NT5DC1Q5TFE4 455 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 NOTUMQ6P988 496 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 FOXD4L3Q6VB84 417 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 THNSL1Q8IYQ7 743 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 LRRC43Q8N309 656 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 DEPTORQ8TB45 409 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 BCL7CQ8WUZ0 217 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 KIFAP3Q92845 792 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 PGBD4Q96DM1 585 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 AK8Q96MA6 479 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 ASB2Q96Q27 587 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 APOL6Q9BWW8 343 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 COL25A1Q9BXS0 654 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 CCSER1Q9C0I3 900 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 LMAN2LQ9H0V9 348 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 NXF3Q9H4D5 531 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 ZSCAN16Q9H4T2 348 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 NSUN3Q9H649 340 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 RSAD1Q9HA92 442 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 PRMT7Q9NVM4 692 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 PCDHB12Q9Y5F1 795 aa11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 SRPRBQ9Y5M8 271 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 TDRD15B5MCY1 1934 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-213ENST00000571886 A0A087X0B3 334 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 CCDC169A6NNP5 214 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 LINC01565O15544 149 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 POMCP01189 267 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 GALTP07902 379 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 ITGA4P13612 1032 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 GUCY2CP25092 1073 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 DLX2Q07687 328 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 SLC39A14Q15043 492 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 PCBP1Q15365 356 aaKnown RBP eCLIP11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 GLB1LQ6UWU2 654 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 ZBTB8OSQ8IWT0 167 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms