RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 CATSPER4Q7RTX7 472 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 ZNF280BQ86YH2 543 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 REXO1Q8N1G1 1221 aaKnown RBP12.76□□□□□ -0.37
CHMP6-202ENST00000571457 MYADMQ96S97 322 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 BCO2Q9BYV7 579 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 PLEKHA4Q9H4M7 779 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 PIDD1Q9HB75 910 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 ZFP37Q9Y6Q3 630 aaPredicted RBP12.76□□□□□ -0.37
CHMP6-202ENST00000571457 CNTNAP2Q9UHC6 1331 aa12.76□□□□□ -0.37
CHMP6-202ENST00000571457 A0A087WZ62 844 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 ANHXE9PGG2 379 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 TEX28O15482 410 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 LAMTOR5O43504 91 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 STARD6P59095 220 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 LMNB2Q03252 620 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 FUT2Q10981 343 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 TARBP2Q15633 366 aaKnown RBP12.75□□□□□ -0.37
CHMP6-202ENST00000571457 WDR81Q562E7 1941 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 CCDC12Q8WUD4 166 aaPredicted RBP12.75□□□□□ -0.37
CHMP6-202ENST00000571457 ATRIPQ8WXE1 791 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 PHKBQ93100 1093 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 FDXACB1Q9BRP7 624 aaPredicted RBP12.75□□□□□ -0.37
CHMP6-202ENST00000571457 HERC2P3Q9BVR0 1158 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 LRRC2Q9BYS8 371 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 RSAD1Q9HA92 442 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 C6orf50Q9HD87 102 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 FBXO4Q9UKT5 387 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 PCDHB2Q9Y5E7 798 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 PCDHGA2Q9Y5H1 932 aa12.75□□□□□ -0.37
CHMP6-202ENST00000571457 ESYT2A0FGR8 921 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 MEIS3P2A8K0S8 358 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 NRP1O14786 923 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 ZBTB43O43298 467 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 NR1I2O75469 434 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 RFPL2O75678 378 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 DDHD2O94830 711 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 PAPLNO95428 1278 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 CIITAP33076 1130 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 GLUD2P49448 558 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 DRP2Q13474 957 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 HTR4Q13639 388 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 XKR3Q5GH77 459 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 MRPL10Q7Z7H8 261 aaKnown RBP12.74□□□□□ -0.37
CHMP6-202ENST00000571457 RHPN2Q8IUC4 686 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 RIT2Q99578 217 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 JPH2Q9BR39 696 aaPredicted RBP12.74□□□□□ -0.37
CHMP6-202ENST00000571457 NIFKQ9BYG3 293 aaKnown RBP12.74□□□□□ -0.37
CHMP6-202ENST00000571457 FOXQ1Q9C009 403 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 RXFP1Q9HBX9 757 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 UBN1Q9NPG3 1134 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 SPATA6Q9NWH7 488 aaPredicted RBP12.74□□□□□ -0.37
CHMP6-202ENST00000571457 ZDHHC7Q9NXF8 308 aa12.74□□□□□ -0.37
CHMP6-202ENST00000571457 SUCLA2Q9P2R7 463 aaPredicted RBP12.74□□□□□ -0.37
CHMP6-202ENST00000571457 CDV3Q9UKY7 258 aaKnown RBP12.74□□□□□ -0.37
CHMP6-202ENST00000571457 CNOT1A5YKK6 2376 aaKnown RBP12.74□□□□□ -0.37
CHMP6-202ENST00000571457 IGKV6-21A0A0C4DH24 114 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 KANSL1LA0AUZ9 987 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 SLC27A2O14975 620 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 B4GALT3O60512 393 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 GAS7O60861 476 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 GLULP15104 373 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 GNA11P29992 359 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 MAGEA9P43362 315 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 ATXN1P54253 815 aaKnown RBP12.73□□□□□ -0.37
CHMP6-202ENST00000571457 MTERF2Q49AM1 385 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 AGMOQ6ZNB7 445 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 MAML2Q8IZL2 1156 aaPredicted RBP12.73□□□□□ -0.37
CHMP6-202ENST00000571457 RDM1Q8NG50 284 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 EXOC6Q8TAG9 804 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 ZNF707Q96C28 371 aaPredicted RBP12.73□□□□□ -0.37
CHMP6-202ENST00000571457 OSBPL6Q9BZF3 934 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 PRKD2Q9BZL6 878 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 ZMYND12Q9H0C1 365 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 NT5C3AQ9H0P0 336 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.73□□□□□ -0.37
CHMP6-202ENST00000571457 AGPAT5Q9NUQ2 364 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 SEPT9Q9UHD8 586 aaPredicted RBP12.73□□□□□ -0.37
CHMP6-202ENST00000571457 NUMBLQ9Y6R0 609 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 FAM208BQ5VWN6 2430 aa12.73□□□□□ -0.37
CHMP6-202ENST00000571457 MIA3Q5JRA6 1907 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 ANKRD11Q6UB99 2663 aaPredicted RBP12.72□□□□□ -0.37
CHMP6-202ENST00000571457 POTEMA6NI47 508 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 CHMP2AO43633 222 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 GAS2O43903 313 aaKnown RBP12.72□□□□□ -0.37
CHMP6-202ENST00000571457 POMCP01189 267 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 CREMQ03060 361 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 PRKCQQ04759 706 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 UGCGQ16739 394 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 PFKFB3Q16875 520 aaPredicted RBP12.72□□□□□ -0.37
CHMP6-202ENST00000571457 CREB3L3Q68CJ9 461 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 POTEGQ6S5H5 508 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 GET4Q7L5D6 327 aaPredicted RBP12.72□□□□□ -0.37
CHMP6-202ENST00000571457 GPR65Q8IYL9 337 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 CNNM3Q8NE01 707 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 BICD2Q8TD16 824 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 LENG9Q96B70 501 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 NLRP4Q96MN2 994 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 RTKNQ9BST9 563 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 TEKT3Q9BXF9 490 aa12.72□□□□□ -0.37
CHMP6-202ENST00000571457 PRG3Q9Y2Y8 225 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms