RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 WRAP73Q9P2S5 460 aaPredicted RBP18.83■□□□□ 0.6
SCARF1-205ENST00000571272 IGLV3-22A0A075B6J6 115 aa18.83■□□□□ 0.6
SCARF1-205ENST00000571272 TISP43B9A030 160 aa18.83■□□□□ 0.6
SCARF1-205ENST00000571272 PPIP5K2O43314 1243 aa18.83■□□□□ 0.6
SCARF1-205ENST00000571272 CFBP00751 764 aa18.83■□□□□ 0.6
SCARF1-205ENST00000571272 COMTP21964 271 aa18.83■□□□□ 0.6
SCARF1-205ENST00000571272 BFSP1Q12934 665 aa18.83■□□□□ 0.6
SCARF1-205ENST00000571272 RHOT2Q8IXI1 618 aa18.83■□□□□ 0.6
SCARF1-205ENST00000571272 BTBD6Q96KE9 485 aa18.83■□□□□ 0.6
SCARF1-205ENST00000571272 ACP6Q9NPH0 428 aa18.83■□□□□ 0.6
SCARF1-205ENST00000571272 TRPC6Q9Y210 931 aa18.83■□□□□ 0.6
SCARF1-205ENST00000571272 SUGT1Q9Y2Z0 365 aa18.83■□□□□ 0.6
SCARF1-205ENST00000571272 SYNGAP1Q96PV0 1343 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 ADAMTSL1Q8N6G6 1762 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 G3V3G9 751 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 PPEF1O14829 653 aaPredicted RBP18.82■□□□□ 0.6
SCARF1-205ENST00000571272 CHRNA3P32297 505 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 RBM5P52756 815 aaKnown RBP eCLIP18.82■□□□□ 0.6
SCARF1-205ENST00000571272 DRG2P55039 364 aaKnown RBP18.82■□□□□ 0.6
SCARF1-205ENST00000571272 NEDD9Q14511 834 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 KIF22Q14807 665 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 SLC15A2Q16348 729 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 FAM133BQ5BKY9 247 aaKnown RBP18.82■□□□□ 0.6
SCARF1-205ENST00000571272 DCAF8Q5TAQ9 597 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 ARHGEF19Q8IW93 802 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 CCDC105Q8IYK2 499 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 DMAC2Q9NW81 257 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 MTRF1LQ9UGC7 380 aaKnown RBP18.82■□□□□ 0.6
SCARF1-205ENST00000571272 GGT7Q9UJ14 662 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 PYGMP11217 842 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 CRKP46108 304 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 KIAA0825Q8IV33 1275 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 RPUSD2Q8IZ73 545 aaKnown RBP18.82■□□□□ 0.6
SCARF1-205ENST00000571272 ZSWIM1Q9BR11 485 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 EMSYQ7Z589 1322 aa18.82■□□□□ 0.6
SCARF1-205ENST00000571272 C6orf118Q5T5N4 469 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 LMO3Q8TAP4 145 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 P3H4Q92791 437 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 KAT5Q92993 513 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.81■□□□□ 0.6
SCARF1-205ENST00000571272 SAMD15Q9P1V8 674 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 BAIAP2L1Q9UHR4 511 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 ODF2LQ9ULJ1 636 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 CD2APQ9Y5K6 639 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 C10orf71Q711Q0 1435 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 DNAJC8O75937 253 aaPredicted RBP18.81■□□□□ 0.6
SCARF1-205ENST00000571272 GHRP10912 638 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 HOXA10P31260 410 aaPredicted RBP18.81■□□□□ 0.6
SCARF1-205ENST00000571272 LRRC14Q15048 493 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 PPP2R5AQ15172 486 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 SH3BP5LQ7L8J4 393 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 PIGWQ7Z7B1 504 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 MGARPQ8TDB4 240 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 POP1Q99575 1024 aaKnown RBP18.81■□□□□ 0.6
SCARF1-205ENST00000571272 MCM8Q9UJA3 840 aa18.81■□□□□ 0.6
SCARF1-205ENST00000571272 RASGRF2O14827 1237 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 BCRP11274 1271 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 GCLMP48507 274 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 ELF3P78545 371 aaPredicted RBP18.8■□□□□ 0.6
SCARF1-205ENST00000571272 ADCY2Q08462 1091 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 WLSQ5T9L3 541 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 SEL1L2Q5TEA6 688 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 HHIPL2Q6UWX4 724 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 OTUD6AQ7L8S5 288 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 TCP11Q8WWU5 503 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 TBC1D31Q96DN5 1066 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 TUFT1Q9NNX1 390 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 PI4KBQ9UBF8 816 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 MIF4GDA9UHW6 222 aaKnown RBP18.8■□□□□ 0.6
SCARF1-205ENST00000571272 ASAP2O43150 1006 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 RIPK2O43353 540 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 AGTP01019 485 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 NF2P35240 595 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 GPC5P78333 572 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 NFIL3Q16649 462 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 SAMD1Q6SPF0 538 aaPredicted RBP18.8■□□□□ 0.6
SCARF1-205ENST00000571272 CRAMP1Q96RY5 1269 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 PCYOX1Q9UHG3 505 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 PCDHA3Q9Y5H8 950 aa18.8■□□□□ 0.6
SCARF1-205ENST00000571272 KDM4FA0A1W2PPD8 638 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 PODXLO00592 558 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 GAS7O60861 476 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 PSMD10O75832 226 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 BMP3P12645 472 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 CTNNA2P26232 953 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 JAG1P78504 1218 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 PPP3CAQ08209 521 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 CCDC50Q8IVM0 306 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 SP8Q8IXZ3 490 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 DHX37Q8IY37 1157 aaKnown RBP18.79■□□□□ 0.6
SCARF1-205ENST00000571272 PCDHB18PQ96TA0 734 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.79■□□□□ 0.6
SCARF1-205ENST00000571272 GREB1LQ9C091 1923 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-205ENST00000571272 MGRN1O60291 552 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 CLTAP09496 248 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 MMP14P50281 582 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 PEX5P50542 639 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 AUHQ13825 339 aaKnown RBP18.79■□□□□ 0.6
SCARF1-205ENST00000571272 NBPF9Q3BBW0 867 aa18.79■□□□□ 0.6
SCARF1-205ENST00000571272 C11orf63Q6NUN7 778 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms