RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 NLRP11P59045 1033 aaKnown RBP13.07□□□□□ -0.32
CDRT1-206ENST00000571263 PPP2R3AQ06190 1150 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 FILIP1LQ4L180 1135 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 CDKAL1Q5VV42 579 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 USP37Q86T82 979 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 ZC3H3Q8IXZ2 948 aaKnown RBP13.07□□□□□ -0.32
CDRT1-206ENST00000571263 CCDC155Q8N6L0 562 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 BICD1Q96G01 975 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 SCLT1Q96NL6 688 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 MED15Q96RN5 788 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 FGFBP2Q9BYJ0 223 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 IFT122Q9HBG6 1241 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 FRMD4BQ9Y2L6 1034 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 SCN10AQ9Y5Y9 1956 aa13.07□□□□□ -0.32
CDRT1-206ENST00000571263 KAT6AQ92794 2004 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 A0A087WZ62 844 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 TRIM49BA6NDI0 452 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 INO80B-WBP1J3KQ70 363 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 HNRNPDLO14979 420 aaKnown RBP13.06□□□□□ -0.32
CDRT1-206ENST00000571263 TLR3O15455 904 aaKnown RBP13.06□□□□□ -0.32
CDRT1-206ENST00000571263 SERPINC1P01008 464 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 NR3C1P04150 777 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 PRKCBP05771 671 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 ZNF18P17022 549 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 NR2F2P24468 414 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 AXLP30530 894 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 PSMC2P35998 433 aaKnown RBP13.06□□□□□ -0.32
CDRT1-206ENST00000571263 PMS1P54277 932 aaKnown RBP13.06□□□□□ -0.32
CDRT1-206ENST00000571263 MARSP56192 900 aaKnown RBP13.06□□□□□ -0.32
CDRT1-206ENST00000571263 ENPEPQ07075 957 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 KYAT1Q16773 422 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 C1orf53Q5VUE5 145 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 GDF6Q6KF10 455 aaPredicted RBP13.06□□□□□ -0.32
CDRT1-206ENST00000571263 ARMCX5Q6P1M9 558 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 FRMD5Q7Z6J6 570 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 KSR1Q8IVT5 923 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 DNAJB3Q8WWF6 145 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 FDXACB1Q9BRP7 624 aaPredicted RBP13.06□□□□□ -0.32
CDRT1-206ENST00000571263 CCDC113Q9H0I3 377 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 FAM49AQ9H0Q0 323 aaPredicted RBP13.06□□□□□ -0.32
CDRT1-206ENST00000571263 AGPAT3Q9NRZ7 376 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 DMAC2Q9NW81 257 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 LIMA1Q9UHB6 759 aaKnown RBP13.06□□□□□ -0.32
CDRT1-206ENST00000571263 STYXL1Q9Y6J8 313 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 SQORQ9Y6N5 450 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 GRIN2DO15399 1336 aa13.06□□□□□ -0.32
CDRT1-206ENST00000571263 KCNJ18B7U540 433 aa13.05□□□□□ -0.32
CDRT1-206ENST00000571263 GPR32O75388 356 aa13.05□□□□□ -0.32
CDRT1-206ENST00000571263 TOM1L1O75674 476 aa13.05□□□□□ -0.32
CDRT1-206ENST00000571263 ERLIN2O94905 339 aa13.05□□□□□ -0.32
CDRT1-206ENST00000571263 VTNP04004 478 aa13.05□□□□□ -0.32
CDRT1-206ENST00000571263 EPB41P11171 864 aaKnown RBP13.05□□□□□ -0.32
CDRT1-206ENST00000571263 SFPQP23246 707 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDRT1-206ENST00000571263 EIF4BP23588 611 aaKnown RBP13.05□□□□□ -0.32
CDRT1-206ENST00000571263 CDK7P50613 346 aa13.05□□□□□ -0.32
CDRT1-206ENST00000571263 MRPS6P82932 125 aaKnown RBP13.05□□□□□ -0.32
CDRT1-206ENST00000571263 POU5F1Q01860 360 aaKnown RBP13.05□□□□□ -0.32
CDRT1-206ENST00000571263 PRPF4BQ13523 1007 aaKnown RBP13.05□□□□□ -0.32
CDRT1-206ENST00000571263 KCNJ12Q14500 433 aa13.05□□□□□ -0.32
CDRT1-206ENST00000571263 TCP11X2Q5H9J9 407 aa13.05□□□□□ -0.32
CDRT1-206ENST00000571263 TSHZ1Q6ZSZ6 1077 aa13.05□□□□□ -0.32
CDRT1-206ENST00000571263 XXYLT1Q8NBI6 393 aa13.05□□□□□ -0.32
CDRT1-206ENST00000571263 CELF4Q9BZC1 486 aaKnown RBP13.05□□□□□ -0.32
CDRT1-206ENST00000571263 ADAMTS10Q9H324 1103 aa13.05□□□□□ -0.32
CDRT1-206ENST00000571263 SAMSN1Q9NSI8 373 aaKnown RBP13.05□□□□□ -0.32
CDRT1-206ENST00000571263 TRPV2Q9Y5S1 764 aa13.05□□□□□ -0.32
CDRT1-206ENST00000571263 ADGRA3Q8IWK6 1321 aa13.05□□□□□ -0.32
CDRT1-206ENST00000571263 FRMPD3Q5JV73 1810 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 CLDN3O15551 220 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 EXOC3O60645 756 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 DARSP14868 501 aaKnown RBP13.04□□□□□ -0.32
CDRT1-206ENST00000571263 PLCB2Q00722 1185 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 MBTD1Q05BQ5 628 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 KCNA1Q09470 495 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 HIC1Q14526 733 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 CCDC40Q4G0X9 1142 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 RUFY4Q6ZNE9 571 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 LRRC55Q6ZSA7 311 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 CAGE1Q8TC20 777 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 POMGNT1Q8WZA1 660 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 TOX2Q96NM4 488 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 TCHPQ9BT92 498 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 KIFC3Q9BVG8 833 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 TRIM5Q9C035 493 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 HSD3B7Q9H2F3 369 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 TNFSF13BQ9Y275 285 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 ZMYM2Q9UBW7 1377 aa13.04□□□□□ -0.32
CDRT1-206ENST00000571263 CLIC2O15247 247 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 PARNO95453 639 aaKnown RBP13.03□□□□□ -0.32
CDRT1-206ENST00000571263 KRT13P13646 458 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 MTIF2P46199 727 aaKnown RBP13.03□□□□□ -0.32
CDRT1-206ENST00000571263 UBASH3AP57075 661 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 ZNF200P98182 395 aaPredicted RBP13.03□□□□□ -0.32
CDRT1-206ENST00000571263 FANCCQ00597 558 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 BFSP2Q13515 415 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 TMEM132AQ24JP5 1023 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 KIZQ2M2Z5 673 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 FAM26DQ5JW98 314 aa13.03□□□□□ -0.32
CDRT1-206ENST00000571263 ATF7IP2Q5U623 682 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms