RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 FAM167AQ96KS9 214 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 CELF4Q9BZC1 486 aaKnown RBP14.81□□□□□ -0.04
CCDC40-205ENST00000571028 CSRNP2Q9H175 543 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 ZSWIM4Q9H7M6 989 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 NGRNQ9NPE2 291 aaKnown RBP14.81□□□□□ -0.04
CCDC40-205ENST00000571028 BMP2KQ9NSY1 1161 aaPredicted RBP14.81□□□□□ -0.04
CCDC40-205ENST00000571028 CFAP45Q9UL16 551 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 GINS2Q9Y248 185 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 LZTS1Q9Y250 596 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 ATP6V1DQ9Y5K8 247 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 TTC3P53804 2025 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 FSCN2O14926 492 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 SPATA31C1P0DKV0 1188 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 KLRC1P26715 233 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 CA8P35219 290 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 NASPP49321 788 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-205ENST00000571028 CLCN5P51795 746 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 KRT85P78386 507 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 KRT17Q04695 432 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 ITIH3Q06033 890 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 PDIA5Q14554 519 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 XKR9Q5GH70 373 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 ZNF484Q5JVG2 852 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 ODR4Q5SWX8 454 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 HAUS3Q68CZ6 603 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 SYCE2Q6PIF2 218 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 POTEGQ6S5H5 508 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 IGSF22Q8N9C0 903 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 MRPS27Q92552 414 aaKnown RBP14.8□□□□□ -0.04
CCDC40-205ENST00000571028 CEP170P1Q96L14 293 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 CCDC43Q96MW1 224 aaKnown RBP14.8□□□□□ -0.04
CCDC40-205ENST00000571028 HSD17B14Q9BPX1 270 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 TUFT1Q9NNX1 390 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 C1orf112Q9NSG2 853 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 TYW1Q9NV66 732 aaKnown RBP14.8□□□□□ -0.04
CCDC40-205ENST00000571028 FBXO2Q9UK22 296 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-205ENST00000571028 KIAA1024Q9UPX6 916 aa14.8□□□□□ -0.04
CCDC40-205ENST00000571028 STBD1O95210 358 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 YEATS4O95619 227 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 YWHABP31946 246 aaKnown RBP14.79□□□□□ -0.04
CCDC40-205ENST00000571028 UBA7P41226 1012 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 ME1P48163 572 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 ECM1Q16610 540 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 MTHFD1LQ6UB35 978 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 FAM43BQ6ZT52 329 aaPredicted RBP14.79□□□□□ -0.04
CCDC40-205ENST00000571028 ANO5Q75V66 913 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 OTUD6AQ7L8S5 288 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 DGLUCYQ7Z3D6 616 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 TMC7Q7Z402 723 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 CABP7Q86V35 215 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 C4orf19Q8IY42 314 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 METTL13Q8N6R0 699 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 KRI1Q8N9T8 703 aaKnown RBP14.79□□□□□ -0.04
CCDC40-205ENST00000571028 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
CCDC40-205ENST00000571028 TMEM87AQ8NBN3 555 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 CDK5RAP3Q96JB5 506 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 SPATA32Q96LK8 384 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 PPP1R16BQ96T49 567 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 ADAM2Q99965 735 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 POLR3CQ9BUI4 534 aaPredicted RBP14.79□□□□□ -0.04
CCDC40-205ENST00000571028 POMKQ9H5K3 350 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 ATP6V0A4Q9HBG4 840 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 GDPD2Q9HCC8 539 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 CHMP5Q9NZZ3 219 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 PCDHA2Q9Y5H9 948 aa14.79□□□□□ -0.04
CCDC40-205ENST00000571028 RPS6KA5O75582 802 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 ASGR2P07307 311 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 RPA1P27694 616 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 PPM1AP35813 382 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 LONP1P36776 959 aaKnown RBP14.78□□□□□ -0.04
CCDC40-205ENST00000571028 MTHFRP42898 656 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 BMS1Q14692 1282 aaKnown RBP14.78□□□□□ -0.04
CCDC40-205ENST00000571028 FAM102BQ5T8I3 360 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 ATL3Q6DD88 541 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 USP49Q70CQ1 688 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 SLC24A5Q71RS6 500 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 NME8Q8N427 588 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 LRRC71Q8N4P6 559 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 EPSTI1Q96J88 318 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 MMTAG2Q9BU76 263 aaKnown RBP14.78□□□□□ -0.04
CCDC40-205ENST00000571028 ADAM7Q9H2U9 754 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 TMX1Q9H3N1 280 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 SMOC2Q9H3U7 446 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 DDX19AQ9NUU7 478 aaKnown RBP14.78□□□□□ -0.04
CCDC40-205ENST00000571028 CIZ1Q9ULV3 898 aaPredicted RBP14.78□□□□□ -0.04
CCDC40-205ENST00000571028 SRPRBQ9Y5M8 271 aaKnown RBP14.78□□□□□ -0.04
CCDC40-205ENST00000571028 STK24Q9Y6E0 443 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 KIAA1671Q9BY89 1806 aa14.78□□□□□ -0.04
CCDC40-205ENST00000571028 KDM3AQ9Y4C1 1321 aa14.77□□□□□ -0.04
CCDC40-205ENST00000571028 SMIM35A0A1B0GVV1 85 aa14.77□□□□□ -0.05
CCDC40-205ENST00000571028 HIDE1A8MVS5 230 aa14.77□□□□□ -0.05
CCDC40-205ENST00000571028 ZBTB42B2RXF5 422 aa14.77□□□□□ -0.05
CCDC40-205ENST00000571028 E9PMD0 336 aa14.77□□□□□ -0.05
CCDC40-205ENST00000571028 SSBP05455 408 aaKnown RBP eCLIP14.77□□□□□ -0.05
CCDC40-205ENST00000571028 CLCN3P51790 818 aa14.77□□□□□ -0.05
CCDC40-205ENST00000571028 PLCB3Q01970 1234 aa14.77□□□□□ -0.05
CCDC40-205ENST00000571028 TBC1D8BQ0IIM8 1120 aa14.77□□□□□ -0.05
CCDC40-205ENST00000571028 KCNC3Q14003 757 aa14.77□□□□□ -0.05
CCDC40-205ENST00000571028 SMC1AQ14683 1233 aaKnown RBP14.77□□□□□ -0.05
CCDC40-205ENST00000571028 KARSQ15046 597 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms