RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 LMBR1Q8WVP7 490 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 PGBD1Q96JS3 809 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 FCRL3Q96P31 734 aaPredicted RBP9.42□□□□□ -0.9
SNX29-208ENST00000569801 OSBPL7Q9BZF2 842 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 RC3H2Q9HBD1 1191 aaKnown RBP9.42□□□□□ -0.9
SNX29-208ENST00000569801 SETD4Q9NVD3 440 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 PKD2L1Q9P0L9 805 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 ZNF215Q9UL58 517 aaPredicted RBP9.42□□□□□ -0.9
SNX29-208ENST00000569801 EMSYQ7Z589 1322 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 CAND2O75155 1236 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 CTSHP09668 335 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 C6P13671 934 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 ITPKBP27987 946 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 HSPA4P34932 840 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 RCAN1P53805 252 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 NAPAP54920 295 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 ADAM17P78536 824 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 SNW1Q13573 536 aaKnown RBP9.41□□□□□ -0.9
SNX29-208ENST00000569801 CCNI2Q6ZMN8 369 aaPredicted RBP9.41□□□□□ -0.9
SNX29-208ENST00000569801 Q6ZUG5 572 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 FMNL3Q8IVF7 1028 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 SEPT8Q92599 483 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 CCDC136Q96JN2 1154 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 CDHR1Q96JP9 859 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 JAKMIP1Q96N16 626 aaKnown RBP9.41□□□□□ -0.9
SNX29-208ENST00000569801 DCBLD2Q96PD2 775 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 MYADMQ96S97 322 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 DDX23Q9BUQ8 820 aaKnown RBP9.41□□□□□ -0.9
SNX29-208ENST00000569801 ANO3Q9BYT9 981 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 RIC8AQ9NPQ8 531 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 TMEM260Q9NX78 707 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 SNX14Q9Y5W7 946 aa9.41□□□□□ -0.9
SNX29-208ENST00000569801 V9GY48 417 aaPredicted RBP9.41□□□□□ -0.9
SNX29-208ENST00000569801 NID2Q14112 1375 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 TEX51A0A1B0GUA7 166 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 SMCO2A6NFE2 343 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 hCG_1984214I3L0E3 225 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 MAFGO15525 162 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 HMGB1P09429 215 aaKnown RBP9.4□□□□□ -0.9
SNX29-208ENST00000569801 GNAT1P11488 350 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 MARK3P27448 753 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 CNR2P34972 360 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 ADD1P35611 737 aaKnown RBP9.4□□□□□ -0.9
SNX29-208ENST00000569801 METAP2P50579 478 aaKnown RBP eCLIP9.4□□□□□ -0.9
SNX29-208ENST00000569801 ADCY7P51828 1080 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 ARHGAP4P98171 946 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 APOBRQ0VD83 1088 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 ZBTB41Q5SVQ8 909 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 CCDC149Q6ZUS6 474 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 RAB44Q7Z6P3 723 aaPredicted RBP9.4□□□□□ -0.9
SNX29-208ENST00000569801 TEX2Q8IWB9 1127 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 ZNF687Q8N1G0 1237 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 ZNF713Q8N859 430 aaPredicted RBP9.4□□□□□ -0.9
SNX29-208ENST00000569801 FEZF2Q8TBJ5 459 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 SEPT1Q8WYJ6 367 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 CLDN23Q96B33 292 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 ZNF689Q96CS4 500 aaPredicted RBP9.4□□□□□ -0.9
SNX29-208ENST00000569801 PSMG3-AS1Q96PY0 264 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 PCYT2Q99447 389 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 MXRA8Q9BRK3 442 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 JPH1Q9HDC5 661 aaPredicted RBP9.4□□□□□ -0.9
SNX29-208ENST00000569801 KCNH7Q9NS40 1196 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 BARHL2Q9NY43 387 aa9.4□□□□□ -0.9
SNX29-208ENST00000569801 NAP1L2Q9ULW6 460 aaPredicted RBP9.4□□□□□ -0.9
SNX29-208ENST00000569801 FLNCQ14315 2725 aa9.4□□□□□ -0.91
SNX29-208ENST00000569801 ZMYM2Q9UBW7 1377 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 NRCAMQ92823 1304 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 CHURC1-FNTBB4DL54 471 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 FSCN2O14926 492 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 ADAMTS3O15072 1205 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 EPN2O95208 641 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 FOSP01100 380 aaPredicted RBP9.39□□□□□ -0.91
SNX29-208ENST00000569801 CD72P21854 359 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 SREBF1P36956 1147 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 FNTBP49356 437 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 CLK2P49760 499 aaKnown RBP9.39□□□□□ -0.91
SNX29-208ENST00000569801 PPFIA1Q13136 1202 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 ITGB3BPQ13352 177 aaPredicted RBP9.39□□□□□ -0.91
SNX29-208ENST00000569801 AP3B2Q13367 1082 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 PPP2R5DQ14738 602 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 GRIK4Q16099 956 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 PFKFB3Q16875 520 aaPredicted RBP9.39□□□□□ -0.91
SNX29-208ENST00000569801 CEP55Q53EZ4 464 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 FAM26DQ5JW98 314 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 PLPP4Q5VZY2 271 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 PDE12Q6L8Q7 609 aaKnown RBP9.39□□□□□ -0.91
SNX29-208ENST00000569801 BLOC1S2Q6QNY1 142 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 BRF1Q92994 677 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 EHMT1Q9H9B1 1298 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 AGO4Q9HCK5 861 aaKnown RBP9.39□□□□□ -0.91
SNX29-208ENST00000569801 LTB4R2Q9NPC1 389 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 SLC2A4RGQ9NR83 387 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 ERAP1Q9NZ08 941 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 DKK4Q9UBT3 224 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 LOXHD1Q8IVV2 1947 aa9.39□□□□□ -0.91
SNX29-208ENST00000569801 F8P00451 2351 aa9.38□□□□□ -0.91
SNX29-208ENST00000569801 COL5A1P20908 1838 aaPredicted RBP9.38□□□□□ -0.91
SNX29-208ENST00000569801 NFASCO94856 1347 aa9.38□□□□□ -0.91
SNX29-208ENST00000569801 MBLAC1A4D2B0 266 aaPredicted RBP9.38□□□□□ -0.91
SNX29-208ENST00000569801 MEIS1O00470 390 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms