RNA–Protein interactions for RNA: ENST00000569335.1

HERC2-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-211ENST00000569335 EIF3DO15371 548 aaKnown RBP eCLIP7.2□□□□□ -1.26
HERC2-211ENST00000569335 MSH4O15457 936 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 MED24O75448 989 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 TADA3O75528 432 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 PSMD10O75832 226 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 EYA4O95677 639 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 ICAM1P05362 532 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 FAM86B2P0C5J1 330 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 POLR2MP0CAP2 368 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 H2AFXP16104 143 aaPredicted RBP7.2□□□□□ -1.26
HERC2-211ENST00000569335 KRT9P35527 623 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 CHRNA4P43681 627 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 ZNF131P52739 623 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 KRT83P78385 493 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 ATP2B2Q01814 1243 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 CXCL9Q07325 125 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 SUZ12Q15022 739 aaKnown RBP7.2□□□□□ -1.26
HERC2-211ENST00000569335 TNIP1Q15025 636 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 SHROOM1Q2M3G4 852 aaPredicted RBP7.2□□□□□ -1.26
HERC2-211ENST00000569335 VWA3BQ502W6 1294 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 HSP90AA4PQ58FG1 418 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 FKBP15Q5T1M5 1219 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 CIAPIN1Q6FI81 312 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 WDR59Q6PJI9 974 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 KRT26Q7Z3Y9 468 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 CATSPER3Q86XQ3 398 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 C1orf127Q8N9H9 656 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 TEPSINQ96N21 525 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 NUP88Q99567 741 aaPredicted RBP7.2□□□□□ -1.26
HERC2-211ENST00000569335 RIT2Q99578 217 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 EIF3CQ99613 913 aaKnown RBP7.2□□□□□ -1.26
HERC2-211ENST00000569335 CCDC94Q9BW85 323 aaPredicted RBP7.2□□□□□ -1.26
HERC2-211ENST00000569335 KIAA1683Q9H0B3 1180 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 VPS16Q9H269 839 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 KCTD10Q9H3F6 313 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 NDST4Q9H3R1 872 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 MRPL44Q9H9J2 332 aaKnown RBP7.2□□□□□ -1.26
HERC2-211ENST00000569335 PANK4Q9NVE7 773 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 ZNHIT6Q9NWK9 470 aaKnown RBP7.2□□□□□ -1.26
HERC2-211ENST00000569335 FAM53CQ9NYF3 392 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 KANSL3Q9P2N6 904 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 SEL1LQ9UBV2 794 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 FBXL5Q9UKA1 691 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 CD2APQ9Y5K6 639 aa7.2□□□□□ -1.26
HERC2-211ENST00000569335 LOXHD1Q8IVV2 1947 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 SSU72P8A0A1W2PR75 194 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 TCP10L2B9ZVM9 353 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 RBAK-RBAKDNI3L0D1 243 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 FZD9O00144 591 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 MEIS1O00470 390 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 PDXKO00764 312 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 SLC16A3O15427 465 aaKnown RBP7.19□□□□□ -1.26
HERC2-211ENST00000569335 ATP8B1O43520 1251 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 CTNND1O60716 968 aaKnown RBP7.19□□□□□ -1.26
HERC2-211ENST00000569335 KIF4AO95239 1232 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 NDUFA10O95299 355 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 LYPLA2O95372 231 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 TUBBP07437 444 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 GAP43P17677 238 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 ANXA13P27216 316 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 CASQ1P31415 396 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 CYLC1P35663 651 aaPredicted RBP7.19□□□□□ -1.26
HERC2-211ENST00000569335 ARHGAP25P42331 645 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 ECE1P42892 770 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 ATP11AP98196 1134 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 GOLGA8FQ08AF8 430 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 GOLGA8DPQ0D2H9 430 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 GIT2Q14161 759 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 MYBPC2Q14324 1141 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 GRIK4Q16099 956 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 CEP55Q53EZ4 464 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 ARSHQ5FYA8 562 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 KIAA1755Q5JYT7 1200 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 GDF6Q6KF10 455 aaPredicted RBP7.19□□□□□ -1.26
HERC2-211ENST00000569335 XRRA1Q6P2D8 792 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 RSRC2Q7L4I2 434 aaKnown RBP7.19□□□□□ -1.26
HERC2-211ENST00000569335 OTOP1Q7RTM1 612 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 MCF2L2Q86YR7 1114 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 WFDC8Q8IUA0 241 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 TRIM59Q8IWR1 403 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 MSL3Q8N5Y2 521 aaKnown RBP7.19□□□□□ -1.26
HERC2-211ENST00000569335 ZNF397Q8NF99 534 aaPredicted RBP7.19□□□□□ -1.26
HERC2-211ENST00000569335 ACER1Q8TDN7 264 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 HOOK2Q96ED9 719 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 SPACA7Q96KW9 195 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 C12orf42Q96LP6 360 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 PLIN2Q99541 437 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 WDR18Q9BV38 432 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 NOC4LQ9BVI4 516 aaKnown RBP7.19□□□□□ -1.26
HERC2-211ENST00000569335 WDR11Q9BZH6 1224 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 TAOK3Q9H2K8 898 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 SLC39A2Q9NP94 309 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 MYOZ2Q9NPC6 264 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 ZNF277Q9NRM2 450 aaPredicted RBP7.19□□□□□ -1.26
HERC2-211ENST00000569335 ZNF112Q9UJU3 913 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 MYO6Q9UM54 1294 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 DNM3Q9UQ16 869 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 MAPK8IP1Q9UQF2 711 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 COL4A3BPQ9Y5P4 624 aa7.19□□□□□ -1.26
HERC2-211ENST00000569335 EPN1Q9Y6I3 576 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms