RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 TRAIPQ9BWF2 469 aa12.55□□□□□ -0.4
CHRFAM7A-206ENST00000569278 NRDE2Q9H7Z3 1164 aa12.55□□□□□ -0.4
CHRFAM7A-206ENST00000569278 TBC1D13Q9NVG8 400 aa12.55□□□□□ -0.4
CHRFAM7A-206ENST00000569278 VPS54Q9P1Q0 977 aa12.55□□□□□ -0.4
CHRFAM7A-206ENST00000569278 DNAJB4Q9UDY4 337 aa12.55□□□□□ -0.4
CHRFAM7A-206ENST00000569278 IRAK3Q9Y616 596 aa12.55□□□□□ -0.4
CHRFAM7A-206ENST00000569278 CACNA1AO00555 2505 aa12.55□□□□□ -0.4
CHRFAM7A-206ENST00000569278 DOCK8Q8NF50 2099 aa12.55□□□□□ -0.4
CHRFAM7A-206ENST00000569278 A0A087WZ62 844 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 PRR23AA6NEV1 266 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 ZC3H11AO75152 810 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 TDP2O95551 362 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 EOMESO95936 686 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 CTSAP10619 480 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 NPR3P17342 541 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 NBL1P41271 181 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 SLC11A1P49279 550 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 ITIH3Q06033 890 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 PTPN14Q15678 1187 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 LONRF3Q496Y0 759 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 Q6ZUG5 572 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 KSR1Q8IVT5 923 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 ZDHHC14Q8IZN3 488 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 ABI1Q8IZP0 508 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 VPS52Q8N1B4 723 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 ETNPPLQ8TBG4 499 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 ATOH1Q92858 354 aaPredicted RBP12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 MBOAT7Q96N66 472 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 NECTIN4Q96NY8 510 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 HS3ST6Q96QI5 342 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 RIT2Q99578 217 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 FDXACB1Q9BRP7 624 aaPredicted RBP12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 NIFKQ9BYG3 293 aaKnown RBP12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 NCOA5Q9HCD5 579 aaKnown RBP12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 C6orf50Q9HD87 102 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 WRAP73Q9P2S5 460 aaPredicted RBP12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 PUF60Q9UHX1 559 aaKnown RBP12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 NR2E1Q9Y466 385 aa12.54□□□□□ -0.4
CHRFAM7A-206ENST00000569278 PTPRZ1P23471 2315 aaPredicted RBP12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 LILRB3O75022 631 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 N4BP1O75113 896 aaKnown RBP12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 OFD1O75665 1012 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 EFEMP2O95967 443 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 GALTP07902 379 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 ZSCAN20P17040 1043 aaPredicted RBP12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 RPS6KB1P23443 525 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 KRT17Q04695 432 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 TBC1D8BQ0IIM8 1120 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 MTERF2Q49AM1 385 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 TPRNQ4KMQ1 711 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 PLA2G4FQ68DD2 849 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 ANO5Q75V66 913 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 DDX53Q86TM3 631 aaKnown RBP12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 ZNF280BQ86YH2 543 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 UBALD2Q8IYN6 164 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 NLRP7Q8WX94 980 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 MRPL9Q9BYD2 267 aaKnown RBP12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 IFT122Q9HBG6 1241 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 SEPT9Q9UHD8 586 aaPredicted RBP12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 KIF3AQ9Y496 699 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 SAMM50Q9Y512 469 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 COL4A3Q01955 1670 aa12.53□□□□□ -0.4
CHRFAM7A-206ENST00000569278 EML1O00423 815 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 GAS7O60861 476 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CXCL14O95715 111 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TMOD1P28289 359 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 MTHFRP42898 656 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 EVCP57679 992 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 Q4G0T1 1027 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 UBXN11Q5T124 520 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 LRCH2Q5VUJ6 765 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TMC5Q6UXY8 1006 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 AGMOQ6ZNB7 445 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 ZBTB33Q86T24 672 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TDRD5Q8NAT2 981 aaKnown RBP12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 DDX12PQ92771 950 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 AIFM3Q96NN9 605 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 LLPHQ9BRT6 129 aaKnown RBP12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 RNF26Q9BY78 433 aaPredicted RBP12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 MINDY3Q9H8M7 445 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 FAM105AQ9NUU6 356 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 DZANK1Q9NVP4 752 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 MARCH5Q9NX47 278 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 LIMD1Q9UGP4 676 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 VAV3Q9UKW4 847 aa12.52□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CYP3A7-CYP3A51PA0A087WV96 503 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 F8W810 466 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 PI15O43692 258 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 SLC37A4O43826 429 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 ZNF623O75123 536 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 MAFO75444 373 aaPredicted RBP12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 DDHD2O94830 711 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 IFNAR1P17181 557 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CYP3A7P24462 503 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 GNA11P29992 359 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 HOXA11P31270 313 aaPredicted RBP12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 SFNP31947 248 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CLCN4P51793 760 aa12.51□□□□□ -0.41
CHRFAM7A-206ENST00000569278 JAK3P52333 1124 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms