RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 CCDC195A0A1B0GUA6 201 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 C2CD2LO14523 706 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 INPPL1O15357 1258 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 DDHD2O94830 711 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 GLUD1P00367 558 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 SOD2P04179 222 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 USP11P51784 963 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 AK2P54819 239 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 PUM1Q14671 1186 aaKnown RBP eCLIP13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 AGMOQ6ZNB7 445 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 MIER3Q7Z3K6 550 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 SLC44A3Q8N4M1 653 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 CCDC148Q8NFR7 591 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 RIN2Q8WYP3 895 aaPredicted RBP13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 RPS6KC1Q96S38 1066 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 CEP89Q96ST8 783 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 JPH2Q9BR39 696 aaPredicted RBP13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 CA14Q9ULX7 337 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 GPR179Q6PRD1 2367 aa13.25□□□□□ -0.29
GTF3C1-209ENST00000568569 CACNA1BQ00975 2339 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 TMEM150BA6NC51 233 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 NRP1O14786 923 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 TEX28O15482 410 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 MAFO75444 373 aaPredicted RBP13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 PSMD10O75832 226 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 POMCP01189 267 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 FGD1P98174 961 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 AKAP17AQ02040 695 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 KRT32Q14532 448 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 SPECC1Q5M775 1068 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 PHLDB3Q6NSJ2 640 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 MRPL10Q7Z7H8 261 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 KSR1Q8IVT5 923 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 RUBCNQ92622 972 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 MYADMQ96S97 322 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 SH2D3AQ9BRG2 576 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 HERC2P3Q9BVR0 1158 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 ARHGEF3Q9NR81 526 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 SIT1Q9Y3P8 196 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 TPRP12270 2363 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 EPG5Q9HCE0 2579 aa13.24□□□□□ -0.29
GTF3C1-209ENST00000568569 PRPF3O43395 683 aaKnown RBP13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 EDIL3O43854 480 aa13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 RFPL2O75678 378 aa13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 STBD1O95210 358 aa13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 DCNP07585 359 aaKnown RBP13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 HMGB1P09429 215 aaKnown RBP13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 GLUD2P49448 558 aa13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 AFF1P51825 1210 aaKnown RBP13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 ADCK5Q3MIX3 580 aa13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 TSGA10IPQ3SY00 556 aa13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 C1orf210Q8IVY1 113 aa13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 GPR152Q8TDT2 470 aa13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 SMG7Q92540 1137 aaKnown RBP13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 GJA10Q969M2 543 aa13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 IFT122Q9HBG6 1241 aa13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 MARCH5Q9NX47 278 aa13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 PRG3Q9Y2Y8 225 aaPredicted RBP13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 COL4A3BPQ9Y5P4 624 aa13.23□□□□□ -0.29
GTF3C1-209ENST00000568569 DDX11L8A8MPP1 907 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 SP9P0CG40 484 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 Q4G0T1 1027 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 B3GNT9Q6UX72 402 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 GET4Q7L5D6 327 aaPredicted RBP13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 SRGAP1Q7Z6B7 1085 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 RNF168Q8IYW5 571 aaPredicted RBP13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 RASEFQ8IZ41 740 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 HDAC7Q8WUI4 952 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 SLC7A3Q8WY07 619 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 PHKBQ93100 1093 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 C22orf23Q9BZE7 217 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 PLEKHA4Q9H4M7 779 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 PIDD1Q9HB75 910 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 RXFP1Q9HBX9 757 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 UBN1Q9NPG3 1134 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 ZDHHC7Q9NXF8 308 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 DLL3Q9NYJ7 618 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 DLGAP2Q9P1A6 1054 aa13.22□□□□□ -0.29
GTF3C1-209ENST00000568569 NID2Q14112 1375 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 PAPLNO95428 1278 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 C1RP00736 705 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 MYBP10242 640 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 LAMP2P13473 410 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 NCLP19338 710 aaKnown RBP13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 HOXA11P31270 313 aaPredicted RBP13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 OR1G1P47890 313 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 PSMC5P62195 406 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 DSG1Q02413 1049 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 KIAA0319Q5VV43 1072 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 PLA2G4FQ68DD2 849 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 DCLRE1AQ6PJP8 1040 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 ANO5Q75V66 913 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 TAS1R1Q7RTX1 841 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 COLGALT2Q8IYK4 626 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 CNNM3Q8NE01 707 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 PJA1Q8NG27 643 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 TBCKQ8TEA7 893 aa13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 PSPC1Q8WXF1 523 aaKnown RBP13.21□□□□□ -0.29
GTF3C1-209ENST00000568569 ZNF707Q96C28 371 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms