RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 PTPN22Q9Y2R2 807 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.71□□□□□ -1.02
SMG1-214ENST00000568038 DDX39AO00148 427 aaKnown RBP8.71□□□□□ -1.02
SMG1-214ENST00000568038 IPO5O00410 1097 aaKnown RBP8.71□□□□□ -1.02
SMG1-214ENST00000568038 SPTLC2O15270 562 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 ATP9AO75110 1047 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 FAM13AO94988 1023 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 YEATS4O95619 227 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 BMP15O95972 392 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 IGHA2P01877 340 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 HMGCRP04035 888 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 OR52Z1P0C646 297 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 ZNF865P0CJ78 1059 aaPredicted RBP8.71□□□□□ -1.02
SMG1-214ENST00000568038 TXNP10599 105 aaKnown RBP8.71□□□□□ -1.02
SMG1-214ENST00000568038 PTGS1P23219 599 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 CNGA1P29973 690 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 ICAM3P32942 547 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 ADCYAP1R1P41586 468 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 ATP2C1P98194 919 aaPredicted RBP8.71□□□□□ -1.02
SMG1-214ENST00000568038 CACNB2Q08289 660 aaPredicted RBP8.71□□□□□ -1.02
SMG1-214ENST00000568038 ZNF211Q13398 564 aaPredicted RBP8.71□□□□□ -1.02
SMG1-214ENST00000568038 ORC2Q13416 577 aaPredicted RBP8.71□□□□□ -1.02
SMG1-214ENST00000568038 TTLL4Q14679 1199 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 SLC39A14Q15043 492 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 LY6KQ17RY6 165 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 CCDC144BQ3MJ40 725 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 TMEM63BQ5T3F8 832 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 PHLDB3Q6NSJ2 640 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 TAPT1Q6NXT6 567 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 CTU1Q7Z7A3 348 aaKnown RBP8.71□□□□□ -1.02
SMG1-214ENST00000568038 SLFN12Q8IYM2 578 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 KLHL23Q8NBE8 558 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 TRPV1Q8NER1 839 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 ETNPPLQ8TBG4 499 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 SH3TC2Q8TF17 1288 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 UBASH3BQ8TF42 649 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 SCFD2Q8WU76 684 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 HAS1Q92839 578 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 COPS5Q92905 334 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 PMEPA1Q969W9 287 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 CDHR1Q96JP9 859 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 MTMR9Q96QG7 549 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 CHRDQ9H2X0 955 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 BCAS3Q9H6U6 928 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 KCNMB3Q9NPA1 279 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 DZANK1Q9NVP4 752 aa8.71□□□□□ -1.02
SMG1-214ENST00000568038 TCHHQ07283 1943 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 MYH15Q9Y2K3 1946 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 RBM47A0AV96 593 aaKnown RBP8.7□□□□□ -1.02
SMG1-214ENST00000568038 EREGO14944 169 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 TBX3O15119 743 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 MAFGO15525 162 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 HYAL3O43820 417 aaPredicted RBP8.7□□□□□ -1.02
SMG1-214ENST00000568038 GAS7O60861 476 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 PHACTR2O75167 634 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 ARIH2O95376 493 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 TGFB3P10600 412 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 CYBAP13498 195 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 KCNA2P16389 499 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 FSTP19883 344 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 UBA1P22314 1058 aaKnown RBP8.7□□□□□ -1.02
SMG1-214ENST00000568038 CCND3P30281 292 aaPredicted RBP8.7□□□□□ -1.02
SMG1-214ENST00000568038 TECP42680 631 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 SP2Q02086 613 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 SP4Q02446 784 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 TNFAIP2Q03169 654 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 ITGB3BPQ13352 177 aaPredicted RBP8.7□□□□□ -1.02
SMG1-214ENST00000568038 LRP8Q14114 963 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 GJC2Q5T442 439 aaPredicted RBP8.7□□□□□ -1.02
SMG1-214ENST00000568038 LRCH2Q5VUJ6 765 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 IQSEC1Q6DN90 963 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 CCDC62Q6P9F0 684 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 KCNV1Q6PIU1 500 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 LEO1Q8WVC0 666 aaPredicted RBP8.7□□□□□ -1.02
SMG1-214ENST00000568038 SLC5A5Q92911 643 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 FAM20AQ96MK3 541 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 CLIC6Q96NY7 704 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 SDF4Q9BRK5 362 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 TEKT3Q9BXF9 490 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 SCAND2PQ9GZW5 306 aaPredicted RBP8.7□□□□□ -1.02
SMG1-214ENST00000568038 TTC12Q9H892 705 aaPredicted RBP8.7□□□□□ -1.02
SMG1-214ENST00000568038 FOXD3Q9UJU5 478 aaPredicted RBP8.7□□□□□ -1.02
SMG1-214ENST00000568038 DDX41Q9UJV9 622 aaKnown RBP8.7□□□□□ -1.02
SMG1-214ENST00000568038 RCOR1Q9UKL0 485 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 FAM184BQ9ULE4 1060 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 PCDHA12Q9UN75 941 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 KIAA1217Q5T5P2 1943 aa8.7□□□□□ -1.02
SMG1-214ENST00000568038 LRRC37A2A6NM11 1700 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 VWA3AA6NCI4 1184 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 H3BRJ5 948 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 LAD1O00515 517 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 DHX15O43143 795 aaKnown RBP8.69□□□□□ -1.02
SMG1-214ENST00000568038 ADCY6O43306 1168 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 CHMP2AO43633 222 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 ADAM11O75078 769 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 PSMD10O75832 226 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 GGPS1O95749 300 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 GH1P01241 217 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 PRPHP41219 470 aa8.69□□□□□ -1.02
SMG1-214ENST00000568038 ME1P48163 572 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms