RNA–Protein interactions for RNA: ENST00000567869.1

HERC2-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 3,523 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-209ENST00000567869 NUDCD1Q96RS6 583 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 MIS12Q9H081 205 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 RBM38Q9H0Z9 239 aaKnown RBP9.51□□□□□ -0.89
HERC2-209ENST00000567869 NLRC4Q9NPP4 1024 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 EXOC1Q9NV70 894 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 ARHGEF38Q9NXL2 777 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 NR2E3Q9Y5X4 410 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 V9GY48 417 aaPredicted RBP9.51□□□□□ -0.89
HERC2-209ENST00000567869 SPATA31A6Q5VVP1 1343 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 PNPLA7Q6ZV29 1317 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 WDR19Q8NEZ3 1342 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 COL5A3P25940 1745 aaPredicted RBP9.51□□□□□ -0.89
HERC2-209ENST00000567869 LIFRP42702 1097 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 PSMD7P51665 324 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 ZNF568Q3ZCX4 644 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 KHDC1Q4VXA5 237 aaKnown RBP9.51□□□□□ -0.89
HERC2-209ENST00000567869 TTC38Q5R3I4 469 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 KLC3Q6P597 504 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 FBXO33Q7Z6M2 555 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 KSR1Q8IVT5 923 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.51□□□□□ -0.89
HERC2-209ENST00000567869 RAB3IPQ96QF0 476 aaPredicted RBP9.51□□□□□ -0.89
HERC2-209ENST00000567869 CGREF1Q99674 301 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 DCLRE1BQ9H816 532 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 PP2D1A8MPX8 630 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 TMEM110-MUSTN1A8MSY1 372 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 RBAK-RBAKDNI3L0D1 243 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 P4HA2O15460 535 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 IFNAR1P17181 557 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 TM4SF1P30408 202 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 KRT2P35908 639 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 KIF11P52732 1056 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 GFPT1Q06210 699 aaPredicted RBP9.51□□□□□ -0.89
HERC2-209ENST00000567869 AP1B1Q10567 949 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 TBL3Q12788 808 aaKnown RBP9.51□□□□□ -0.89
HERC2-209ENST00000567869 MEI1Q5TIA1 1274 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 ZNF365Q70YC5 407 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 AGGF1Q8N302 714 aaeCLIP9.51□□□□□ -0.89
HERC2-209ENST00000567869 RIOK1Q9BRS2 568 aaKnown RBP9.51□□□□□ -0.89
HERC2-209ENST00000567869 TMEM109Q9BVC6 243 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 TRAIPQ9BWF2 469 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 UBAP1Q9NZ09 502 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 ARL2BPQ9Y2Y0 163 aa9.51□□□□□ -0.89
HERC2-209ENST00000567869 BTAF1O14981 1849 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 USP17L12C9JPN9 530 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 USP17L21D6R901 530 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 PSMA7O14818 248 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 ENTPD5O75356 428 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 HALP42357 657 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 PDE6CP51160 858 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 MECOMQ03112 1051 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 MTMR3Q13615 1198 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 FAM47AQ5JRC9 791 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 SH2D4BQ5SQS7 431 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 HOOK3Q86VS8 718 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 NME8Q8N427 588 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 RNF10Q8N5U6 811 aaKnown RBP9.5□□□□□ -0.89
HERC2-209ENST00000567869 DDX27Q96GQ7 796 aaKnown RBP9.5□□□□□ -0.89
HERC2-209ENST00000567869 AP1M1Q9BXS5 423 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 GOLPH3Q9H4A6 298 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 TUT1Q9H6E5 874 aaKnown RBP9.5□□□□□ -0.89
HERC2-209ENST00000567869 PTTG2Q9NZH5 202 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 SUCLA2Q9P2R7 463 aaPredicted RBP9.5□□□□□ -0.89
HERC2-209ENST00000567869 ZNF180Q9UJW8 692 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 FAM32AQ9Y421 112 aaKnown RBP9.5□□□□□ -0.89
HERC2-209ENST00000567869 RREB1Q92766 1687 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 CPA3P15088 417 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 CCT8P50990 548 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 IFI35P80217 286 aaPredicted RBP9.5□□□□□ -0.89
HERC2-209ENST00000567869 MAP3K10Q02779 954 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 TMEM259Q4ZIN3 620 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 SNX30Q5VWJ9 437 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 MARK2Q7KZI7 788 aaKnown RBP9.5□□□□□ -0.89
HERC2-209ENST00000567869 SGMS1Q86VZ5 419 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 SPATA24Q86W54 205 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 TREML1Q86YW5 311 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 DQX1Q8TE96 717 aaKnown RBP9.5□□□□□ -0.89
HERC2-209ENST00000567869 TAF4BQ92750 862 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 HPS3Q969F9 1004 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 NACC2Q96BF6 587 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 GBP5Q96PP8 586 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 DDX50Q9BQ39 737 aaKnown RBP9.5□□□□□ -0.89
HERC2-209ENST00000567869 FOXP1Q9H334 677 aaPredicted RBP9.5□□□□□ -0.89
HERC2-209ENST00000567869 QTRT2Q9H974 415 aaKnown RBP9.5□□□□□ -0.89
HERC2-209ENST00000567869 PFDN4Q9NQP4 134 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 TUBA8Q9NY65 449 aaPredicted RBP9.5□□□□□ -0.89
HERC2-209ENST00000567869 ZNF148Q9UQR1 794 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 TTLL3Q9Y4R7 772 aa9.5□□□□□ -0.89
HERC2-209ENST00000567869 TSPY2A6NKD2 308 aa9.49□□□□□ -0.89
HERC2-209ENST00000567869 PYGMP11217 842 aa9.49□□□□□ -0.89
HERC2-209ENST00000567869 TCF7P36402 384 aaPredicted RBP9.49□□□□□ -0.89
HERC2-209ENST00000567869 MTTPP55157 894 aa9.49□□□□□ -0.89
HERC2-209ENST00000567869 SH3BGRP55822 239 aaPredicted RBP9.49□□□□□ -0.89
HERC2-209ENST00000567869 ITGA7Q13683 1181 aa9.49□□□□□ -0.89
HERC2-209ENST00000567869 EAPPQ56P03 285 aaPredicted RBP9.49□□□□□ -0.89
HERC2-209ENST00000567869 UBAP2Q5T6F2 1119 aaKnown RBP9.49□□□□□ -0.89
HERC2-209ENST00000567869 DNAAF5Q86Y56 855 aa9.49□□□□□ -0.89
HERC2-209ENST00000567869 DZIP1Q86YF9 867 aaKnown RBP9.49□□□□□ -0.89
HERC2-209ENST00000567869 RBM46Q8TBY0 533 aaKnown RBP9.49□□□□□ -0.89
HERC2-209ENST00000567869 FNDC8Q8TC99 324 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms