RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	KNOP1	Q1ED39	458 aa	Known RBP	10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	CDCA2	Q69YH5	1023 aa	Predicted RBP	10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	LRRC8D	Q7L1W4	858 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	ZBTB33	Q86T24	672 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	CDR2L	Q86X02	465 aa	Predicted RBP	10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	CREBRF	Q8IUR6	639 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	C7orf61	Q8IZ16	206 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	GUF1	Q8N442	669 aa	Known RBP	10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	AOPEP	Q8N6M6	819 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	CAGE1	Q8TC20	777 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	TMEM40	Q8WWA1	233 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	P2RX5	Q93086	422 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	HVCN1	Q96D96	273 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	DHTKD1	Q96HY7	919 aa	Predicted RBP	10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	SCLY	Q96I15	445 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	TSG101	Q99816	390 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	TARS2	Q9BW92	718 aa	Known RBP	10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	GTPBP4	Q9BZE4	634 aa	Known RBP	10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	CCDC113	Q9H0I3	377 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	SEMA6B	Q9H3T3	888 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	HIPK3	Q9H422	1215 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	PCIF1	Q9H4Z3	704 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	TMEM206	Q9H813	350 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	ANKFY1	Q9P2R3	1169 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	NOC2L	Q9Y3T9	749 aa	Known RBP	10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	UBE4B	O95155	1302 aa		10.29	□□□□□ -0.76
FANCA-223	ENST00000567284	ZMYM2	Q9UBW7	1377 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	MICAL3	Q7RTP6	2002 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	TTLL13P	A6NNM8	815 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	HNRNPDL	O14979	420 aa	Known RBP	10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	CALU	O43852	315 aa	Predicted RBP	10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	RPS6KA5	O75582	802 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	RPLP2	P05387	115 aa	Known RBP	10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	IQCF3	P0C7M6	154 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	SELP	P16109	830 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	SFPQ	P23246	707 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	EIF4B	P23588	611 aa	Known RBP	10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	CCNE1	P24864	410 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	PPP1R2	P41236	205 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	CYP2J2	P51589	502 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	PMS1	P54277	932 aa	Known RBP	10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	POU5F1B	Q06416	359 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	FAM26D	Q5JW98	314 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	C1orf53	Q5VUE5	145 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	ANKRD40	Q6AI12	368 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	ARMCX5	Q6P1M9	558 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	UBE2Q1	Q7Z7E8	422 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	RPAIN	Q86UA6	219 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	FAM228A	Q86W67	206 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	RNF214	Q8ND24	703 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	ZBTB45	Q96K62	511 aa	Predicted RBP	10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	TOX2	Q96NM4	488 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	TCHP	Q9BT92	498 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	NOC4L	Q9BVI4	516 aa	Known RBP	10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	STRA6	Q9BX79	667 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	MRPL4	Q9BYD3	311 aa	Known RBP	10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	NAT10	Q9H0A0	1025 aa	Known RBP	10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	ST6GALNAC4	Q9H4F1	302 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	CBX8	Q9HC52	389 aa		10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	PRMT7	Q9NVM4	692 aa	Predicted RBP	10.28	□□□□□ -0.76
FANCA-223	ENST00000567284	TDRD15	B5MCY1	1934 aa	Known RBP	10.27	□□□□□ -0.76
FANCA-223	ENST00000567284	BICDL2	A1A5D9	508 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	GOLGA8IP	A6NC78	632 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	GOLGA8J	A6NMD2	632 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	TSPAN1	O60635	241 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	CAND2	O75155	1236 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	CD52	P31358	61 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	ABCD1	P33897	745 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	ZNF165	P49910	485 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	NCBP1	Q09161	790 aa	Known RBP	10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	PAK2	Q13177	524 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	LPIN1	Q14693	890 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	BMT2	Q1RMZ1	405 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	COBLL1	Q53SF7	1204 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	HSP90AA4P	Q58FG1	418 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	FBXO47	Q5MNV8	452 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	ATF7IP2	Q5U623	682 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	TRAF7	Q6Q0C0	670 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	HS2ST1	Q7LGA3	356 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	DEFB128	Q7Z7B8	93 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	MAP4K3	Q8IVH8	894 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	ZNF710	Q8N1W2	664 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	POMGNT1	Q8WZA1	660 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	DPF3	Q92784	378 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	EEF2KMT	Q96G04	330 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	ACO2	Q99798	780 aa	Known RBP	10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	NFKBIZ	Q9BYH8	718 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	GBP3	Q9H0R5	595 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	KCTD10	Q9H3F6	313 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	FZD8	Q9H461	694 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	AGO3	Q9H9G7	860 aa	Known RBP	10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	TYW1	Q9NV66	732 aa	Known RBP	10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	RWDD2A	Q9UIY3	292 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	ST3GAL5	Q9UNP4	418 aa		10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	PIN4	Q9Y237	131 aa	Known RBP	10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	PDCD11	Q14690	1871 aa	Known RBP	10.27	□□□□□ -0.77
FANCA-223	ENST00000567284	LTBP2	Q14767	1821 aa		10.26	□□□□□ -0.77
FANCA-223	ENST00000567284	TRIM43B	A6NCK2	446 aa		10.26	□□□□□ -0.77
FANCA-223	ENST00000567284	BECN2	A8MW95	431 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms