RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 FBXL6Q8N531 539 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 SLC22A17Q8WUG5 538 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 RIPOR3Q96MK2 946 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 APOL5Q9BWW9 433 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 RSAD1Q9HA92 442 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 ANKEF1Q9NU02 776 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 PCDHA12Q9UN75 941 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 INPP5FQ9Y2H2 1132 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.72■□□□□ 0.27
RNF40-209ENST00000566703 XRCC6P12956 609 aaKnown RBP eCLIP16.72■□□□□ 0.27
RNF40-209ENST00000566703 NCLP19338 710 aaKnown RBP16.72■□□□□ 0.27
RNF40-209ENST00000566703 SLC11A1P49279 550 aa16.72■□□□□ 0.27
RNF40-209ENST00000566703 NR5A1Q13285 461 aa16.72■□□□□ 0.27
RNF40-209ENST00000566703 CTTNQ14247 550 aaKnown RBP16.72■□□□□ 0.27
RNF40-209ENST00000566703 EMC2Q15006 297 aa16.72■□□□□ 0.27
RNF40-209ENST00000566703 LONRF3Q496Y0 759 aa16.72■□□□□ 0.27
RNF40-209ENST00000566703 ATAT1Q5SQI0 421 aa16.72■□□□□ 0.27
RNF40-209ENST00000566703 UBXN11Q5T124 520 aa16.72■□□□□ 0.27
RNF40-209ENST00000566703 ALYREFQ86V81 257 aaKnown RBP16.72■□□□□ 0.27
RNF40-209ENST00000566703 TMEM173Q86WV6 379 aaPredicted RBP16.72■□□□□ 0.27
RNF40-209ENST00000566703 TPH2Q8IWU9 490 aa16.72■□□□□ 0.27
RNF40-209ENST00000566703 RNF149Q8NC42 400 aa16.72■□□□□ 0.27
RNF40-209ENST00000566703 TNFRSF25Q93038 417 aa16.72■□□□□ 0.27
RNF40-209ENST00000566703 CCDC51Q96ER9 411 aa16.72■□□□□ 0.27
RNF40-209ENST00000566703 FAM193BQ96PV7 902 aaPredicted RBP16.72■□□□□ 0.27
RNF40-209ENST00000566703 MTRQ99707 1265 aa16.72■□□□□ 0.27
RNF40-209ENST00000566703 HSD17B14Q9BPX1 270 aa16.72■□□□□ 0.27
RNF40-209ENST00000566703 MINDY3Q9H8M7 445 aa16.72■□□□□ 0.27
RNF40-209ENST00000566703 FAN1Q9Y2M0 1017 aa16.72■□□□□ 0.27
RNF40-209ENST00000566703 TECTAO75443 2155 aa16.71■□□□□ 0.27
RNF40-209ENST00000566703 CA8P35219 290 aa16.71■□□□□ 0.27
RNF40-209ENST00000566703 PTENP60484 403 aa16.71■□□□□ 0.27
RNF40-209ENST00000566703 TFDP1Q14186 410 aa16.71■□□□□ 0.27
RNF40-209ENST00000566703 ZNF280BQ86YH2 543 aa16.71■□□□□ 0.27
RNF40-209ENST00000566703 ASIC4Q96FT7 647 aa16.71■□□□□ 0.27
RNF40-209ENST00000566703 EIF2AK1Q9BQI3 630 aaKnown RBP16.71■□□□□ 0.27
RNF40-209ENST00000566703 EMILIN2Q9BXX0 1053 aa16.71■□□□□ 0.27
RNF40-209ENST00000566703 POMKQ9H5K3 350 aa16.71■□□□□ 0.27
RNF40-209ENST00000566703 DNAJB4Q9UDY4 337 aa16.71■□□□□ 0.27
RNF40-209ENST00000566703 USTQ9Y2C2 406 aa16.71■□□□□ 0.27
RNF40-209ENST00000566703 ZBTB39O15060 712 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 INPPL1O15357 1258 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 LILRB3O75022 631 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 DGAT1O75907 488 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 DDHD2O94830 711 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 ERLIN2O94905 339 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 CYP4A11Q02928 519 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 CALCRLQ16602 461 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 ME3Q16798 604 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 KIAA1841Q6NSI8 718 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 UBALD2Q8IYN6 164 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 ZDHHC14Q8IZN3 488 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 PLCD3Q8N3E9 789 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 NECAB1Q8N987 351 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 BCL7CQ8WUZ0 217 aaPredicted RBP16.7■□□□□ 0.26
RNF40-209ENST00000566703 GTF3C6Q969F1 213 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 NFKBIZQ9BYH8 718 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 GBP3Q9H0R5 595 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 TTC12Q9H892 705 aaPredicted RBP16.7■□□□□ 0.26
RNF40-209ENST00000566703 XPNPEP1Q9NQW7 623 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 SSX2IPQ9Y2D8 614 aa16.7■□□□□ 0.26
RNF40-209ENST00000566703 FAM205CA6NFA0 338 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 NRP1O14786 923 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 ITGA4P13612 1032 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 ARL2P36404 184 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 MRE11P49959 708 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 NUBP1P53384 320 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 PTPN5P54829 565 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 TRIM29Q14134 588 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 PTPN14Q15678 1187 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 RARS2Q5T160 578 aaKnown RBP16.69■□□□□ 0.26
RNF40-209ENST00000566703 ERICH6BQ5W0A0 696 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 NOTUMQ6P988 496 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 ZBTB33Q86T24 672 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 NSUN7Q8NE18 718 aaKnown RBP16.69■□□□□ 0.26
RNF40-209ENST00000566703 AUTS2Q8WXX7 1259 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 KLHL5Q96PQ7 755 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 IRF2BPLQ9H1B7 796 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 PPP4R2Q9NY27 417 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 SORCS3Q9UPU3 1222 aa16.69■□□□□ 0.26
RNF40-209ENST00000566703 BTBD18B2RXH4 712 aa16.68■□□□□ 0.26
RNF40-209ENST00000566703 C2CD4DB7Z1M9 353 aa16.68■□□□□ 0.26
RNF40-209ENST00000566703 B4GALT3O60512 393 aa16.68■□□□□ 0.26
RNF40-209ENST00000566703 TSPAN1O60635 241 aa16.68■□□□□ 0.26
RNF40-209ENST00000566703 EPCAMP16422 314 aa16.68■□□□□ 0.26
RNF40-209ENST00000566703 AFF1P51825 1210 aaKnown RBP16.68■□□□□ 0.26
RNF40-209ENST00000566703 CABP7Q86V35 215 aa16.68■□□□□ 0.26
RNF40-209ENST00000566703 DIS3L2Q8IYB7 885 aaKnown RBP16.68■□□□□ 0.26
RNF40-209ENST00000566703 HACE1Q8IYU2 909 aa16.68■□□□□ 0.26
RNF40-209ENST00000566703 KREMEN2Q8NCW0 462 aa16.68■□□□□ 0.26
RNF40-209ENST00000566703 SMG8Q8ND04 991 aaKnown RBP16.68■□□□□ 0.26
RNF40-209ENST00000566703 MTMR9Q96QG7 549 aa16.68■□□□□ 0.26
RNF40-209ENST00000566703 VN1R3Q9BXE9 311 aa16.68■□□□□ 0.26
RNF40-209ENST00000566703 CSRNP2Q9H175 543 aa16.68■□□□□ 0.26
RNF40-209ENST00000566703 TSHZ2Q9NRE2 1034 aa16.68■□□□□ 0.26
RNF40-209ENST00000566703 MRPL17Q9NRX2 175 aaKnown RBP16.68■□□□□ 0.26
RNF40-209ENST00000566703 BMP2KQ9NSY1 1161 aaPredicted RBP16.68■□□□□ 0.26
RNF40-209ENST00000566703 GIT1Q9Y2X7 761 aa16.68■□□□□ 0.26
RNF40-209ENST00000566703 IPPQ9Y573 584 aa16.68■□□□□ 0.26
RNF40-209ENST00000566703 MUC6Q6W4X9 2439 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms