RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 ADGRA3Q8IWK6 1321 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 GOLGA6L4A6NEF3 574 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 MYMKA6NI61 221 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 ACKR2O00590 384 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 EOMESO95936 686 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 PRKCBP05771 671 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 PFKFB1P16118 471 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 ZNF697Q5TEC3 545 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 DYMQ7RTS9 669 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 ECHDC2Q86YB7 292 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 KIFC3Q9BVG8 833 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 NKX2-4Q9H2Z4 354 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 KBTBD4Q9NVX7 518 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 ARHGAP28Q9P2N2 729 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 USP25Q9UHP3 1055 aa28.8■■■□□ 2.2
NME3-209ENST00000566600 CNTNAP2Q9UHC6 1331 aa28.79■■■□□ 2.2
NME3-209ENST00000566600 FAM237AA0A1B0GTK4 181 aa28.79■■■□□ 2.2
NME3-209ENST00000566600 A0A1B0GVL5 298 aa28.79■■■□□ 2.2
NME3-209ENST00000566600 HOXA2O43364 376 aa28.79■■■□□ 2.2
NME3-209ENST00000566600 DGKIO75912 1065 aa28.79■■■□□ 2.2
NME3-209ENST00000566600 CA3P07451 260 aa28.79■■■□□ 2.2
NME3-209ENST00000566600 MYOGP15173 224 aa28.79■■■□□ 2.2
NME3-209ENST00000566600 ARF4P18085 180 aaPredicted RBP28.79■■■□□ 2.2
NME3-209ENST00000566600 IBSPP21815 317 aaPredicted RBP28.79■■■□□ 2.2
NME3-209ENST00000566600 PRPF4BQ13523 1007 aaKnown RBP28.79■■■□□ 2.2
NME3-209ENST00000566600 SLC17A8Q8NDX2 589 aa28.79■■■□□ 2.2
NME3-209ENST00000566600 MRPS27Q92552 414 aaKnown RBP28.79■■■□□ 2.2
NME3-209ENST00000566600 ZHX3Q9H4I2 956 aa28.79■■■□□ 2.2
NME3-209ENST00000566600 FAM105AQ9NUU6 356 aa28.79■■■□□ 2.2
NME3-209ENST00000566600 SLC16A4O15374 487 aa28.78■■■□□ 2.2
NME3-209ENST00000566600 ZNF623O75123 536 aa28.78■■■□□ 2.2
NME3-209ENST00000566600 GAP43P17677 238 aa28.78■■■□□ 2.2
NME3-209ENST00000566600 LIG1P18858 919 aa28.78■■■□□ 2.2
NME3-209ENST00000566600 ABCD1P33897 745 aa28.78■■■□□ 2.2
NME3-209ENST00000566600 TMEM132AQ24JP5 1023 aa28.78■■■□□ 2.2
NME3-209ENST00000566600 PPP2R2DQ66LE6 453 aa28.78■■■□□ 2.2
NME3-209ENST00000566600 CEP57L1Q8IYX8 460 aa28.78■■■□□ 2.2
NME3-209ENST00000566600 CNNM3Q8NE01 707 aa28.78■■■□□ 2.2
NME3-209ENST00000566600 SP7Q8TDD2 431 aaPredicted RBP28.78■■■□□ 2.2
NME3-209ENST00000566600 CPB2Q96IY4 423 aa28.78■■■□□ 2.2
NME3-209ENST00000566600 HPSEQ9Y251 543 aa28.78■■■□□ 2.2
NME3-209ENST00000566600 A0A1B0GUA9 196 aa28.77■■■□□ 2.2
NME3-209ENST00000566600 B4GALT5O43286 388 aa28.77■■■□□ 2.2
NME3-209ENST00000566600 FSIP1Q8NA03 581 aa28.77■■■□□ 2.2
NME3-209ENST00000566600 TMEM161BQ8NDZ6 487 aa28.77■■■□□ 2.2
NME3-209ENST00000566600 ZNF689Q96CS4 500 aaPredicted RBP28.77■■■□□ 2.2
NME3-209ENST00000566600 DNAJC19Q96DA6 116 aa28.77■■■□□ 2.2
NME3-209ENST00000566600 PGBD4Q96DM1 585 aa28.77■■■□□ 2.2
NME3-209ENST00000566600 SEL1LQ9UBV2 794 aa28.77■■■□□ 2.2
NME3-209ENST00000566600 PCDHB2Q9Y5E7 798 aa28.77■■■□□ 2.2
NME3-209ENST00000566600 COL4A6Q14031 1691 aa28.77■■■□□ 2.2
NME3-209ENST00000566600 N4BP3O15049 544 aa28.76■■■□□ 2.19
NME3-209ENST00000566600 TRAK2O60296 914 aa28.76■■■□□ 2.19
NME3-209ENST00000566600 SLFN14P0C7P3 912 aa28.76■■■□□ 2.19
NME3-209ENST00000566600 SYKP43405 635 aa28.76■■■□□ 2.19
NME3-209ENST00000566600 NCKAP1LP55160 1127 aa28.76■■■□□ 2.19
NME3-209ENST00000566600 STRN3Q13033 797 aa28.76■■■□□ 2.19
NME3-209ENST00000566600 SLC27A1Q6PCB7 646 aa28.76■■■□□ 2.19
NME3-209ENST00000566600 ZNF598Q86UK7 904 aaKnown RBP28.76■■■□□ 2.19
NME3-209ENST00000566600 FAM178BQ8IXR5 827 aa28.76■■■□□ 2.19
NME3-209ENST00000566600 RSPH1Q8WYR4 309 aa28.76■■■□□ 2.19
NME3-209ENST00000566600 KCNN1Q92952 543 aa28.76■■■□□ 2.19
NME3-209ENST00000566600 ZNF576Q9H609 170 aa28.76■■■□□ 2.19
NME3-209ENST00000566600 RC3H2Q9HBD1 1191 aaKnown RBP28.76■■■□□ 2.19
NME3-209ENST00000566600 UBXN11Q5T124 520 aa28.75■■■□□ 2.19
NME3-209ENST00000566600 CMTR2Q8IYT2 770 aaKnown RBP28.75■■■□□ 2.19
NME3-209ENST00000566600 RNF169Q8NCN4 708 aa28.75■■■□□ 2.19
NME3-209ENST00000566600 TRIM6Q9C030 488 aaPredicted RBP28.75■■■□□ 2.19
NME3-209ENST00000566600 LCHNA4D1U4 455 aa28.74■■■□□ 2.19
NME3-209ENST00000566600 MAPTP10636 758 aaKnown RBP28.74■■■□□ 2.19
NME3-209ENST00000566600 IDEP14735 1019 aa28.74■■■□□ 2.19
NME3-209ENST00000566600 NDUFA8P51970 172 aa28.74■■■□□ 2.19
NME3-209ENST00000566600 BTG3Q14201 252 aaPredicted RBP28.74■■■□□ 2.19
NME3-209ENST00000566600 CNNM4Q6P4Q7 775 aa28.74■■■□□ 2.19
NME3-209ENST00000566600 HAUS6Q7Z4H7 955 aa28.74■■■□□ 2.19
NME3-209ENST00000566600 APBB1IPQ7Z5R6 666 aaPredicted RBP28.74■■■□□ 2.19
NME3-209ENST00000566600 MRPL10Q7Z7H8 261 aaKnown RBP28.74■■■□□ 2.19
NME3-209ENST00000566600 CCDC65Q8IXS2 484 aa28.74■■■□□ 2.19
NME3-209ENST00000566600 HACE1Q8IYU2 909 aa28.74■■■□□ 2.19
NME3-209ENST00000566600 ABI1Q8IZP0 508 aa28.74■■■□□ 2.19
NME3-209ENST00000566600 FIBCD1Q8N539 461 aa28.74■■■□□ 2.19
NME3-209ENST00000566600 STAMQ92783 540 aa28.74■■■□□ 2.19
NME3-209ENST00000566600 ADPGKQ9BRR6 497 aa28.74■■■□□ 2.19
NME3-209ENST00000566600 MRPL4Q9BYD3 311 aaKnown RBP28.74■■■□□ 2.19
NME3-209ENST00000566600 TRIM9Q9C026 710 aa28.74■■■□□ 2.19
NME3-209ENST00000566600 K7ENM7 598 aa28.73■■■□□ 2.19
NME3-209ENST00000566600 TAP1Q03518 808 aa28.73■■■□□ 2.19
NME3-209ENST00000566600 TPRNQ4KMQ1 711 aa28.73■■■□□ 2.19
NME3-209ENST00000566600 C7orf25Q9BPX7 421 aa28.73■■■□□ 2.19
NME3-209ENST00000566600 TMEM117Q9H0C3 514 aa28.73■■■□□ 2.19
NME3-209ENST00000566600 SEMA6BQ9H3T3 888 aa28.73■■■□□ 2.19
NME3-209ENST00000566600 PANK4Q9NVE7 773 aa28.73■■■□□ 2.19
NME3-209ENST00000566600 SERTAD1Q9UHV2 236 aa28.73■■■□□ 2.19
NME3-209ENST00000566600 FRMD3A2A2Y4 597 aa28.72■■■□□ 2.19
NME3-209ENST00000566600 LINC01553A4QN01 128 aa28.72■■■□□ 2.19
NME3-209ENST00000566600 ACTN4O43707 911 aaKnown RBP28.72■■■□□ 2.19
NME3-209ENST00000566600 ATF7P17544 494 aaPredicted RBP28.72■■■□□ 2.19
NME3-209ENST00000566600 NT5DC1Q5TFE4 455 aa28.72■■■□□ 2.19
NME3-209ENST00000566600 ATF7IP2Q5U623 682 aa28.72■■■□□ 2.19
NME3-209ENST00000566600 TAS1R3Q7RTX0 852 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms