RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 SPRED3Q2MJR0 410 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 CCDC25Q86WR0 208 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 CCDC105Q8IYK2 499 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 JPH2Q9BR39 696 aaPredicted RBP15.36■□□□□ 0.05
CDH1-209ENST00000566510 SEMA4AQ9H3S1 761 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 AZI2Q9H6S1 392 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 CNOT10Q9H9A5 744 aaKnown RBP15.36■□□□□ 0.05
CDH1-209ENST00000566510 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.36■□□□□ 0.05
CDH1-209ENST00000566510 KLC4Q9NSK0 619 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 GGA2Q9UJY4 613 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 SYNGAP1Q96PV0 1343 aa15.36■□□□□ 0.05
CDH1-209ENST00000566510 FAM187AA6NFU0 413 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 KIAA0391O15091 583 aaKnown RBP15.35■□□□□ 0.05
CDH1-209ENST00000566510 TRIM37O94972 964 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 CHN1P15882 459 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 COMTP21964 271 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 FGFR4P22455 802 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 VAMP7P51809 220 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 ZNF131P52739 623 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 PPP3CAQ08209 521 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 SEL1L2Q5TEA6 688 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 STRIP1Q5VSL9 837 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 CCDC137Q6PK04 289 aaKnown RBP15.35■□□□□ 0.05
CDH1-209ENST00000566510 BTNL9Q6UXG8 535 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 KAT5Q92993 513 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 RNF25Q96BH1 459 aaPredicted RBP15.35■□□□□ 0.05
CDH1-209ENST00000566510 BTBD6Q96KE9 485 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 TEKT3Q9BXF9 490 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 DNM1LO00429 736 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 PHF2O75151 1096 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 MMEP08473 750 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 IBSPP21815 317 aaPredicted RBP15.35■□□□□ 0.05
CDH1-209ENST00000566510 RPL21P46778 160 aaKnown RBP15.35■□□□□ 0.05
CDH1-209ENST00000566510 DACT2Q5SW24 774 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 PADI6Q6TGC4 694 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 KCTD17Q8N5Z5 321 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 ZSWIM2Q8NEG5 633 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 TATDN2Q93075 761 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 CHMP6Q96FZ7 201 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 XPO6Q96QU8 1125 aaKnown RBP15.35■□□□□ 0.05
CDH1-209ENST00000566510 CBWD1Q9BRT8 395 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 WDR11Q9BZH6 1224 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 CD248Q9HCU0 757 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 SLC40A1Q9NP59 571 aa15.35■□□□□ 0.05
CDH1-209ENST00000566510 CCDC169A6NNP5 214 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 TCP10L2B9ZVM9 353 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 SPOPO43791 374 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 SGPL1O95470 568 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 IFI35P80217 286 aaPredicted RBP15.34■□□□□ 0.05
CDH1-209ENST00000566510 BYSLQ13895 437 aaKnown RBP15.34■□□□□ 0.05
CDH1-209ENST00000566510 UBAP2Q5T6F2 1119 aaKnown RBP15.34■□□□□ 0.05
CDH1-209ENST00000566510 INTS8Q75QN2 995 aaKnown RBP15.34■□□□□ 0.05
CDH1-209ENST00000566510 PPM1KQ8N3J5 372 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 PRELID2Q8N945 189 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 LMO3Q8TAP4 145 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 TLCD1Q96CP7 247 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 TXLNGYQ9BZA5 131 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 ARHGEF10LQ9HCE6 1279 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.34■□□□□ 0.05
CDH1-209ENST00000566510 MTRF1LQ9UGC7 380 aaKnown RBP15.34■□□□□ 0.05
CDH1-209ENST00000566510 UBE4BO95155 1302 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 GOLGA8IPA6NC78 632 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 GOLGA8JA6NMD2 632 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 MIF4GDA9UHW6 222 aaKnown RBP15.34■□□□□ 0.05
CDH1-209ENST00000566510 CHRNA3P32297 505 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 KCNJ1P48048 391 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 SMTNP53814 917 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 CLUL1Q15846 466 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 ZDHHC24Q6UX98 284 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 DAW1Q8N136 415 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 GPATCH11Q8N954 259 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 C3orf20Q8ND61 904 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 ZSWIM1Q9BR11 485 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 EPB41L4BQ9H329 900 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 EHMT1Q9H9B1 1298 aa15.34■□□□□ 0.05
CDH1-209ENST00000566510 LARSQ9P2J5 1176 aaKnown RBP15.34■□□□□ 0.05
CDH1-209ENST00000566510 TCRBV7S2A1N4TA0A589 114 aa15.33■□□□□ 0.05
CDH1-209ENST00000566510 PYGMP11217 842 aa15.33■□□□□ 0.05
CDH1-209ENST00000566510 IFNAR2P48551 515 aa15.33■□□□□ 0.05
CDH1-209ENST00000566510 ANKRD20A8PQ5CZ79 823 aa15.33■□□□□ 0.05
CDH1-209ENST00000566510 ERMARDQ5T6L9 678 aa15.33■□□□□ 0.05
CDH1-209ENST00000566510 TTC27Q6P3X3 843 aa15.33■□□□□ 0.05
CDH1-209ENST00000566510 CPNE8Q86YQ8 564 aa15.33■□□□□ 0.05
CDH1-209ENST00000566510 PRMT6Q96LA8 375 aaPredicted RBP15.33■□□□□ 0.05
CDH1-209ENST00000566510 ACTR5Q9H9F9 607 aaPredicted RBP15.33■□□□□ 0.05
CDH1-209ENST00000566510 CYP26A1O43174 497 aa15.33■□□□□ 0.04
CDH1-209ENST00000566510 PAEPP09466 180 aa15.33■□□□□ 0.04
CDH1-209ENST00000566510 DRD4P21917 467 aa15.33■□□□□ 0.04
CDH1-209ENST00000566510 PDE6BP35913 854 aa15.33■□□□□ 0.04
CDH1-209ENST00000566510 DRP2Q13474 957 aa15.33■□□□□ 0.04
CDH1-209ENST00000566510 CCDC38Q502W7 563 aa15.33■□□□□ 0.04
CDH1-209ENST00000566510 ARMC9Q7Z3E5 817 aa15.33■□□□□ 0.04
CDH1-209ENST00000566510 MIER3Q7Z3K6 550 aa15.33■□□□□ 0.04
CDH1-209ENST00000566510 EPS8L3Q8TE67 593 aaKnown RBP15.33■□□□□ 0.04
CDH1-209ENST00000566510 MASTLQ96GX5 879 aa15.33■□□□□ 0.04
CDH1-209ENST00000566510 HAUS2Q9NVX0 235 aa15.33■□□□□ 0.04
CDH1-209ENST00000566510 KCND2Q9NZV8 630 aa15.33■□□□□ 0.04
CDH1-209ENST00000566510 ANKRD31Q8N7Z5 1873 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 RTN2O75298 545 aa15.32■□□□□ 0.04
CDH1-209ENST00000566510 VIL1P09327 827 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms