RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 C12orf76Q8N812 135 aaPredicted RBP18.46■□□□□ 0.55
TSR3-202ENST00000566296 BCL7CQ8WUZ0 217 aaPredicted RBP18.46■□□□□ 0.55
TSR3-202ENST00000566296 TCP11Q8WWU5 503 aa18.46■□□□□ 0.55
TSR3-202ENST00000566296 TMEM143Q96AN5 459 aa18.46■□□□□ 0.55
TSR3-202ENST00000566296 PHOX2BQ99453 314 aa18.46■□□□□ 0.55
TSR3-202ENST00000566296 LXNQ9BS40 222 aa18.46■□□□□ 0.55
TSR3-202ENST00000566296 TMEM175Q9BSA9 504 aa18.46■□□□□ 0.55
TSR3-202ENST00000566296 PHF20Q9BVI0 1012 aa18.46■□□□□ 0.55
TSR3-202ENST00000566296 EMILIN2Q9BXX0 1053 aa18.46■□□□□ 0.55
TSR3-202ENST00000566296 DHX33Q9H6R0 707 aaKnown RBP18.46■□□□□ 0.55
TSR3-202ENST00000566296 SFXN1Q9H9B4 322 aa18.46■□□□□ 0.55
TSR3-202ENST00000566296 BMP2KQ9NSY1 1161 aaPredicted RBP18.46■□□□□ 0.55
TSR3-202ENST00000566296 KANSL3Q9P2N6 904 aa18.46■□□□□ 0.55
TSR3-202ENST00000566296 DNAJB4Q9UDY4 337 aa18.46■□□□□ 0.55
TSR3-202ENST00000566296 TBX3O15119 743 aa18.45■□□□□ 0.54
TSR3-202ENST00000566296 CCNT1O60563 726 aaKnown RBP18.45■□□□□ 0.54
TSR3-202ENST00000566296 SRGAP2CP0DJJ0 459 aa18.45■□□□□ 0.54
TSR3-202ENST00000566296 YWHABP31946 246 aaKnown RBP18.45■□□□□ 0.54
TSR3-202ENST00000566296 NUBP1P53384 320 aa18.45■□□□□ 0.54
TSR3-202ENST00000566296 EMC2Q15006 297 aa18.45■□□□□ 0.54
TSR3-202ENST00000566296 EPHA7Q15375 998 aa18.45■□□□□ 0.54
TSR3-202ENST00000566296 AGMOQ6ZNB7 445 aa18.45■□□□□ 0.54
TSR3-202ENST00000566296 PIK3AP1Q6ZUJ8 805 aa18.45■□□□□ 0.54
TSR3-202ENST00000566296 OTUD6AQ7L8S5 288 aa18.45■□□□□ 0.54
TSR3-202ENST00000566296 C4orf19Q8IY42 314 aa18.45■□□□□ 0.54
TSR3-202ENST00000566296 ZDHHC14Q8IZN3 488 aa18.45■□□□□ 0.54
TSR3-202ENST00000566296 PLCD3Q8N3E9 789 aa18.45■□□□□ 0.54
TSR3-202ENST00000566296 SLC22A17Q8WUG5 538 aa18.45■□□□□ 0.54
TSR3-202ENST00000566296 PRPF31Q8WWY3 499 aaKnown RBP18.45■□□□□ 0.54
TSR3-202ENST00000566296 USTQ9Y2C2 406 aa18.45■□□□□ 0.54
TSR3-202ENST00000566296 ERLIN2O94905 339 aa18.44■□□□□ 0.54
TSR3-202ENST00000566296 BRD1O95696 1058 aa18.44■□□□□ 0.54
TSR3-202ENST00000566296 PDGFBP01127 241 aaPredicted RBP18.44■□□□□ 0.54
TSR3-202ENST00000566296 LAMTOR4Q0VGL1 99 aa18.44■□□□□ 0.54
TSR3-202ENST00000566296 SCRN1Q12765 414 aa18.44■□□□□ 0.54
TSR3-202ENST00000566296 C8orf34Q49A92 452 aa18.44■□□□□ 0.54
TSR3-202ENST00000566296 NCAPH2Q6IBW4 605 aa18.44■□□□□ 0.54
TSR3-202ENST00000566296 CCDC149Q6ZUS6 474 aa18.44■□□□□ 0.54
TSR3-202ENST00000566296 RNF149Q8NC42 400 aa18.44■□□□□ 0.54
TSR3-202ENST00000566296 CNNM3Q8NE01 707 aa18.44■□□□□ 0.54
TSR3-202ENST00000566296 ASAP2O43150 1006 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 BAG4O95429 457 aaKnown RBP18.43■□□□□ 0.54
TSR3-202ENST00000566296 SSBP05455 408 aaKnown RBP eCLIP18.43■□□□□ 0.54
TSR3-202ENST00000566296 URODP06132 367 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 ASGR2P07307 311 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 KLRC2P26717 231 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 XKR9Q5GH70 373 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 TMC5Q6UXY8 1006 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 MRPL10Q7Z7H8 261 aaKnown RBP18.43■□□□□ 0.54
TSR3-202ENST00000566296 ZNF280BQ86YH2 543 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 POTEDQ86YR6 584 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 SLFN12Q8IYM2 578 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 ATOH1Q92858 354 aaPredicted RBP18.43■□□□□ 0.54
TSR3-202ENST00000566296 ACSF2Q96CM8 615 aaPredicted RBP18.43■□□□□ 0.54
TSR3-202ENST00000566296 MTRQ99707 1265 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 VN1R3Q9BXE9 311 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 ZSWIM4Q9H7M6 989 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 BRMS1Q9HCU9 246 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 MRPL17Q9NRX2 175 aaKnown RBP18.43■□□□□ 0.54
TSR3-202ENST00000566296 FAM86C1Q9NVL1 165 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 WRAP73Q9P2S5 460 aaPredicted RBP18.43■□□□□ 0.54
TSR3-202ENST00000566296 FAN1Q9Y2M0 1017 aa18.43■□□□□ 0.54
TSR3-202ENST00000566296 B4GALT3O60512 393 aa18.42■□□□□ 0.54
TSR3-202ENST00000566296 ALDH2P05091 517 aa18.42■□□□□ 0.54
TSR3-202ENST00000566296 NCLP19338 710 aaKnown RBP18.42■□□□□ 0.54
TSR3-202ENST00000566296 PCBP1Q15365 356 aaKnown RBP eCLIP18.42■□□□□ 0.54
TSR3-202ENST00000566296 KANK3Q6NY19 840 aa18.42■□□□□ 0.54
TSR3-202ENST00000566296 ELMSAN1Q6PJG2 1045 aa18.42■□□□□ 0.54
TSR3-202ENST00000566296 FERMT3Q86UX7 667 aa18.42■□□□□ 0.54
TSR3-202ENST00000566296 ZNF579Q8NAF0 562 aaKnown RBP18.42■□□□□ 0.54
TSR3-202ENST00000566296 WASF1Q92558 559 aa18.42■□□□□ 0.54
TSR3-202ENST00000566296 CCDC51Q96ER9 411 aa18.42■□□□□ 0.54
TSR3-202ENST00000566296 DYDC2Q96IM9 177 aa18.42■□□□□ 0.54
TSR3-202ENST00000566296 CCDC43Q96MW1 224 aaKnown RBP18.42■□□□□ 0.54
TSR3-202ENST00000566296 KLHL5Q96PQ7 755 aa18.42■□□□□ 0.54
TSR3-202ENST00000566296 MINDY3Q9H8M7 445 aa18.42■□□□□ 0.54
TSR3-202ENST00000566296 UBN1Q9NPG3 1134 aa18.42■□□□□ 0.54
TSR3-202ENST00000566296 RGL1Q9NZL6 768 aa18.42■□□□□ 0.54
TSR3-202ENST00000566296 LIMD1Q9UGP4 676 aa18.42■□□□□ 0.54
TSR3-202ENST00000566296 SSX2IPQ9Y2D8 614 aa18.42■□□□□ 0.54
TSR3-202ENST00000566296 DDHD2O94830 711 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 POMCP01189 267 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 ITGA4P13612 1032 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 CLCN4P51793 760 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 CYP4A11Q02928 519 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 NCBP1Q09161 790 aaKnown RBP18.41■□□□□ 0.54
TSR3-202ENST00000566296 TFDP1Q14186 410 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 CTTNQ14247 550 aaKnown RBP18.41■□□□□ 0.54
TSR3-202ENST00000566296 UBXN11Q5T124 520 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 NOTUMQ6P988 496 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 OTOP3Q7RTS5 596 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 GPR149Q86SP6 731 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 OXER1Q8TDS5 423 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 HAS1Q92839 578 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 HERC2P3Q9BVR0 1158 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 MFSD1Q9H3U5 465 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 PRG3Q9Y2Y8 225 aaPredicted RBP18.41■□□□□ 0.54
TSR3-202ENST00000566296 TDRD15B5MCY1 1934 aaKnown RBP18.41■□□□□ 0.54
TSR3-202ENST00000566296 C2orf16Q68DN1 1984 aa18.41■□□□□ 0.54
TSR3-202ENST00000566296 NRP1O14786 923 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms