RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 PANK2Q9BZ23 570 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 NKX2-4Q9H2Z4 354 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 TMEM134Q9H6X4 195 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 KMT5AQ9NQR1 393 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 KBTBD4Q9NVX7 518 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 LRFN2Q9ULH4 789 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 PCDHB7Q9Y5E2 793 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 NPHP3-ACAD11A0A0J9YXS1 232 aa23.23■■□□□ 1.31
SHCBP1-205ENST00000566016 FAM237AA0A1B0GTK4 181 aa23.23■■□□□ 1.31
SHCBP1-205ENST00000566016 H0YCG3 227 aa23.23■■□□□ 1.31
SHCBP1-205ENST00000566016 ACKR2O00590 384 aa23.23■■□□□ 1.31
SHCBP1-205ENST00000566016 ZNF623O75123 536 aa23.23■■□□□ 1.31
SHCBP1-205ENST00000566016 TBCAO75347 108 aaKnown RBP23.23■■□□□ 1.31
SHCBP1-205ENST00000566016 KRT18P05783 430 aaKnown RBP23.23■■□□□ 1.31
SHCBP1-205ENST00000566016 ARF4P18085 180 aaPredicted RBP23.23■■□□□ 1.31
SHCBP1-205ENST00000566016 PPP2R2DQ66LE6 453 aa23.23■■□□□ 1.31
SHCBP1-205ENST00000566016 ZNF598Q86UK7 904 aaKnown RBP23.23■■□□□ 1.31
SHCBP1-205ENST00000566016 DDX12PQ92771 950 aa23.23■■□□□ 1.31
SHCBP1-205ENST00000566016 LRRC27Q9C0I9 530 aa23.23■■□□□ 1.31
SHCBP1-205ENST00000566016 FAM105AQ9NUU6 356 aa23.23■■□□□ 1.31
SHCBP1-205ENST00000566016 KCNH3Q9ULD8 1083 aa23.23■■□□□ 1.31
SHCBP1-205ENST00000566016 KIAA1671Q9BY89 1806 aa23.22■■□□□ 1.31
SHCBP1-205ENST00000566016 A0A1B0GUA9 196 aa23.22■■□□□ 1.31
SHCBP1-205ENST00000566016 MYMKA6NI61 221 aa23.22■■□□□ 1.31
SHCBP1-205ENST00000566016 CCDC169A6NNP5 214 aa23.22■■□□□ 1.31
SHCBP1-205ENST00000566016 POLR2DO15514 142 aaKnown RBP23.22■■□□□ 1.31
SHCBP1-205ENST00000566016 HOXA2O43364 376 aa23.22■■□□□ 1.31
SHCBP1-205ENST00000566016 FAM13AO94988 1023 aa23.22■■□□□ 1.31
SHCBP1-205ENST00000566016 PRKCBP05771 671 aa23.22■■□□□ 1.31
SHCBP1-205ENST00000566016 DHX58Q96C10 678 aa23.22■■□□□ 1.31
SHCBP1-205ENST00000566016 TTYH1Q9H313 450 aaPredicted RBP23.22■■□□□ 1.31
SHCBP1-205ENST00000566016 ZNF576Q9H609 170 aa23.22■■□□□ 1.31
SHCBP1-205ENST00000566016 TSHZ2Q9NRE2 1034 aa23.22■■□□□ 1.31
SHCBP1-205ENST00000566016 HPSEQ9Y251 543 aa23.22■■□□□ 1.31
SHCBP1-205ENST00000566016 LCHNA4D1U4 455 aa23.21■■□□□ 1.31
SHCBP1-205ENST00000566016 SFI1A8K8P3 1242 aa23.21■■□□□ 1.31
SHCBP1-205ENST00000566016 K7ERI5 159 aa23.21■■□□□ 1.31
SHCBP1-205ENST00000566016 B4GALT5O43286 388 aa23.21■■□□□ 1.31
SHCBP1-205ENST00000566016 ATF7P17544 494 aaPredicted RBP23.21■■□□□ 1.31
SHCBP1-205ENST00000566016 NCKAP1LP55160 1127 aa23.21■■□□□ 1.31
SHCBP1-205ENST00000566016 CACNB1Q02641 598 aaPredicted RBP23.21■■□□□ 1.31
SHCBP1-205ENST00000566016 TAP1Q03518 808 aa23.21■■□□□ 1.31
SHCBP1-205ENST00000566016 CNNM4Q6P4Q7 775 aa23.21■■□□□ 1.31
SHCBP1-205ENST00000566016 CMTR2Q8IYT2 770 aaKnown RBP23.21■■□□□ 1.31
SHCBP1-205ENST00000566016 TMEM161BQ8NDZ6 487 aa23.21■■□□□ 1.31
SHCBP1-205ENST00000566016 DNAJC19Q96DA6 116 aa23.21■■□□□ 1.31
SHCBP1-205ENST00000566016 GDPD2Q9HCC8 539 aa23.21■■□□□ 1.31
SHCBP1-205ENST00000566016 LINC01553A4QN01 128 aa23.2■■□□□ 1.3
SHCBP1-205ENST00000566016 PFKFB1P16118 471 aa23.2■■□□□ 1.3
SHCBP1-205ENST00000566016 ABCD1P33897 745 aa23.2■■□□□ 1.3
SHCBP1-205ENST00000566016 AMPD3Q01432 767 aa23.2■■□□□ 1.3
SHCBP1-205ENST00000566016 PRPF4BQ13523 1007 aaKnown RBP23.2■■□□□ 1.3
SHCBP1-205ENST00000566016 UBXN11Q5T124 520 aa23.2■■□□□ 1.3
SHCBP1-205ENST00000566016 SLC27A1Q6PCB7 646 aa23.2■■□□□ 1.3
SHCBP1-205ENST00000566016 SLC17A8Q8NDX2 589 aa23.2■■□□□ 1.3
SHCBP1-205ENST00000566016 CNNM3Q8NE01 707 aa23.2■■□□□ 1.3
SHCBP1-205ENST00000566016 SEL1LQ9UBV2 794 aa23.2■■□□□ 1.3
SHCBP1-205ENST00000566016 USP25Q9UHP3 1055 aa23.2■■□□□ 1.3
SHCBP1-205ENST00000566016 SLC16A4O15374 487 aa23.19■■□□□ 1.3
SHCBP1-205ENST00000566016 CPB2Q96IY4 423 aa23.19■■□□□ 1.3
SHCBP1-205ENST00000566016 SEMA6BQ9H3T3 888 aa23.19■■□□□ 1.3
SHCBP1-205ENST00000566016 PCDHB2Q9Y5E7 798 aa23.19■■□□□ 1.3
SHCBP1-205ENST00000566016 FRMD3A2A2Y4 597 aa23.18■■□□□ 1.3
SHCBP1-205ENST00000566016 N4BP3O15049 544 aa23.18■■□□□ 1.3
SHCBP1-205ENST00000566016 MAPTP10636 758 aaKnown RBP23.18■■□□□ 1.3
SHCBP1-205ENST00000566016 GAP43P17677 238 aa23.18■■□□□ 1.3
SHCBP1-205ENST00000566016 DYMQ7RTS9 669 aa23.18■■□□□ 1.3
SHCBP1-205ENST00000566016 TAS1R3Q7RTX0 852 aa23.18■■□□□ 1.3
SHCBP1-205ENST00000566016 MRPL10Q7Z7H8 261 aaKnown RBP23.18■■□□□ 1.3
SHCBP1-205ENST00000566016 DEFB123Q8N688 67 aa23.18■■□□□ 1.3
SHCBP1-205ENST00000566016 MYCT1Q8N699 235 aa23.18■■□□□ 1.3
SHCBP1-205ENST00000566016 MRPS27Q92552 414 aaKnown RBP23.18■■□□□ 1.3
SHCBP1-205ENST00000566016 FIZ1Q96SL8 496 aa23.18■■□□□ 1.3
SHCBP1-205ENST00000566016 TRIM9Q9C026 710 aa23.18■■□□□ 1.3
SHCBP1-205ENST00000566016 ST6GALNAC4Q9H4F1 302 aa23.18■■□□□ 1.3
SHCBP1-205ENST00000566016 A0A1B0GVL5 298 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 TRAK2O60296 914 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 ARHGEF15O94989 841 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 SLFN14P0C7P3 912 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 BTG3Q14201 252 aaPredicted RBP23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 FAM178BQ8IXR5 827 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 CLP1Q92989 425 aaKnown RBP23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 PGBD4Q96DM1 585 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 SAMD11Q96NU1 681 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 IPO9Q96P70 1041 aaKnown RBP23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 MRPL4Q9BYD3 311 aaKnown RBP23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 TMEM117Q9H0C3 514 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 OLFML3Q9NRN5 406 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 RNF19AQ9NV58 838 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 COL4A4P53420 1690 aaPredicted RBP23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 TTLL13PA6NNM8 815 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 EDN1P05305 212 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 FGFR1P11362 822 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 ERVK-21P61565 698 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 CSPP1Q1MSJ5 1256 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 HAUS6Q7Z4H7 955 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 CEP57L1Q8IYX8 460 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 FIBCD1Q8N539 461 aa23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 TGS1Q96RS0 853 aaKnown RBP23.17■■□□□ 1.3
SHCBP1-205ENST00000566016 PDZD7Q9H5P4 517 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms