RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 PADI3Q9ULW8 664 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 ST3GAL5Q9UNP4 418 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 GINS2Q9Y248 185 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 PHLPP2Q6ZVD8 1323 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.88□□□□□ -0.19
SF3B3-206ENST00000565990 LRRIQ4A6NIV6 560 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 GOLGA6L6A8MZA4 724 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 ACKR2O00590 384 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 CSDE1O75534 798 aaKnown RBP13.88□□□□□ -0.19
SF3B3-206ENST00000565990 RPS6KA5O75582 802 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 SMC2O95347 1197 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 PFKMP08237 780 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 SYN1P17600 705 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 NMT1P30419 496 aaKnown RBP13.88□□□□□ -0.19
SF3B3-206ENST00000565990 AXLP30530 894 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 HOXA11P31270 313 aaPredicted RBP13.88□□□□□ -0.19
SF3B3-206ENST00000565990 STK4Q13043 487 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 CAMK4Q16566 473 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 FAM228AQ86W67 206 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 ZBTB8OSQ8IWT0 167 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 APBB2Q92870 758 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 TMX1Q9H3N1 280 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 MRPL44Q9H9J2 332 aaKnown RBP13.88□□□□□ -0.19
SF3B3-206ENST00000565990 IL23AQ9NPF7 189 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 CHST12Q9NRB3 414 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 PRMT7Q9NVM4 692 aaPredicted RBP13.88□□□□□ -0.19
SF3B3-206ENST00000565990 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.88□□□□□ -0.19
SF3B3-206ENST00000565990 TBX20Q9UMR3 447 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 PCDHB13Q9Y5F0 798 aa13.88□□□□□ -0.19
SF3B3-206ENST00000565990 A0A1B0GUA9 196 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 DENND3A2RUS2 1198 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 PTMAP06454 111 aaKnown RBP13.87□□□□□ -0.19
SF3B3-206ENST00000565990 GHRP10912 638 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 CD52P31358 61 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 PPIGQ13427 754 aaKnown RBP eCLIP13.87□□□□□ -0.193e-6■■□□□ 11.4
SF3B3-206ENST00000565990 ALCAMQ13740 583 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 DSC3Q14574 896 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 MAPK6Q16659 721 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 ZC2HC1CQ53FD0 456 aaPredicted RBP13.87□□□□□ -0.19
SF3B3-206ENST00000565990 COBLL1Q53SF7 1204 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 FAM26FQ5R3K3 315 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 RTN4RL1Q86UN2 441 aaPredicted RBP13.87□□□□□ -0.19
SF3B3-206ENST00000565990 DBF4BQ8NFT6 615 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 ERCC4Q92889 916 aaPredicted RBP13.87□□□□□ -0.19
SF3B3-206ENST00000565990 HPS3Q969F9 1004 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 SMARCE1Q969G3 411 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 HVCN1Q96D96 273 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 KIFC3Q9BVG8 833 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 FGFBP2Q9BYJ0 223 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 GTPBP4Q9BZE4 634 aaKnown RBP13.87□□□□□ -0.19
SF3B3-206ENST00000565990 NUP62CLQ9H1M0 184 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 PTPRHQ9HD43 1115 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 RMND1Q9NWS8 449 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 TBC1D7Q9P0N9 293 aa13.87□□□□□ -0.19
SF3B3-206ENST00000565990 ZMYND8Q9ULU4 1186 aaPredicted RBP13.87□□□□□ -0.19
SF3B3-206ENST00000565990 INO80B-WBP1J3KQ70 363 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 TSPAN1O60635 241 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 CAPN15O75808 1086 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 PIGRP01833 764 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 BMP6P22004 513 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 SFPQP23246 707 aaKnown RBP eCLIP13.86□□□□□ -0.19
SF3B3-206ENST00000565990 HOXD13P35453 343 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 CASP5P51878 434 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 EPHB4P54760 987 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 FAM189BP81408 668 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 MLLT1Q03111 559 aaPredicted RBP13.86□□□□□ -0.19
SF3B3-206ENST00000565990 FPGSQ05932 587 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 PAK2Q13177 524 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 BMT2Q1RMZ1 405 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 TCTN1Q2MV58 587 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 ZNF658Q5TYW1 1059 aaPredicted RBP13.86□□□□□ -0.19
SF3B3-206ENST00000565990 CNKSR3Q6P9H4 555 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 GLIS3Q8NEA6 775 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 SCFD1Q8WVM8 642 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 SEPT8Q92599 483 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 CCDC47Q96A33 483 aaKnown RBP13.86□□□□□ -0.19
SF3B3-206ENST00000565990 SCLT1Q96NL6 688 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 TRAIPQ9BWF2 469 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 FTHL17Q9BXU8 183 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 IFIH1Q9BYX4 1025 aaKnown RBP13.86□□□□□ -0.19
SF3B3-206ENST00000565990 SLC39A2Q9NP94 309 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 AGPAT5Q9NUQ2 364 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 MAN1B1Q9UKM7 699 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 MICAL3Q7RTP6 2002 aa13.86□□□□□ -0.19
SF3B3-206ENST00000565990 TTLL13PA6NNM8 815 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 H0YGN5 161 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 K7ENM7 598 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 ENPP3O14638 875 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 EIF3DO15371 548 aaKnown RBP eCLIP13.85□□□□□ -0.19
SF3B3-206ENST00000565990 EDN1P05305 212 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 PRKCBP05771 671 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 MYBP10242 640 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 ARF4P18085 180 aaPredicted RBP13.85□□□□□ -0.19
SF3B3-206ENST00000565990 FGFR4P22455 802 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 KCNA1Q09470 495 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 NFX1Q12986 1120 aaKnown RBP13.85□□□□□ -0.19
SF3B3-206ENST00000565990 MORC3Q14149 939 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 GLIPR1L2Q4G1C9 344 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 SASS6Q6UVJ0 657 aa13.85□□□□□ -0.19
SF3B3-206ENST00000565990 ZPBP2Q6X784 338 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms