RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 ECHDC2Q86YB7 292 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 CCDC65Q8IXS2 484 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 BSNDQ8WZ55 320 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 DHX58Q96C10 678 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 SAMD11Q96NU1 681 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 REEP2Q9BRK0 252 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 ADPGKQ9BRR6 497 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 ARHGAP28Q9P2N2 729 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 RWDD3Q9Y3V2 267 aa13.87□□□□□ -0.19
SHCBP1-204ENST00000565887 A0A087X0B3 334 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 MYMKA6NI61 221 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 SFI1A8K8P3 1242 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 N4BP3O15049 544 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 TRAK2O60296 914 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 TSPAN1O60635 241 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 PRKCBP05771 671 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 SYKP43405 635 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 RABGGTBP53611 331 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 RAD51AP2Q09MP3 1159 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 TMEM132AQ24JP5 1023 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 ZNF697Q5TEC3 545 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 KANK3Q6NY19 840 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 SLC27A1Q6PCB7 646 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 MRPL10Q7Z7H8 261 aaKnown RBP13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 FAM178BQ8IXR5 827 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 CMTR2Q8IYT2 770 aaKnown RBP13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 ABI1Q8IZP0 508 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 LINC01599Q8WXQ3 324 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 MRPS27Q92552 414 aaKnown RBP13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 ZNF689Q96CS4 500 aaPredicted RBP13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 C7orf25Q9BPX7 421 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 TRIM6Q9C030 488 aaPredicted RBP13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 CCDC113Q9H0I3 377 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 ST6GALNAC4Q9H4F1 302 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 POLD4Q9HCU8 107 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 TSHZ2Q9NRE2 1034 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 FAM105AQ9NUU6 356 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 HPSEQ9Y251 543 aa13.86□□□□□ -0.19
SHCBP1-204ENST00000565887 NPHP3-ACAD11A0A0J9YXS1 232 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 A0A1B0GVL5 298 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 SLC16A4O15374 487 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 PFKFB1P16118 471 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 ARF4P18085 180 aaPredicted RBP13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 NCKAP1LP55160 1127 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 ALCAMQ13740 583 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 AMHR2Q16671 573 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 FAM117BQ6P1L5 589 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 STXBP4Q6ZWJ1 553 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 DYMQ7RTS9 669 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 HAUS6Q7Z4H7 955 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 FIBCD1Q8N539 461 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 TMEM161BQ8NDZ6 487 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 LRRC15Q8TF66 581 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 DNAJC19Q96DA6 116 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 MRPL4Q9BYD3 311 aaKnown RBP13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 ZHX3Q9H4I2 956 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 ZNF576Q9H609 170 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 KANSL3Q9P2N6 904 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 PCDHB2Q9Y5E7 798 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 PCDHB13Q9Y5F0 798 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 CNTNAP2Q9UHC6 1331 aa13.85□□□□□ -0.19
SHCBP1-204ENST00000565887 PVALEFA0A1B0GWK0 134 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 SOX1O00570 391 aaPredicted RBP13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 IDEP14735 1019 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 PBX2P40425 430 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 BTG3Q14201 252 aaPredicted RBP13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 DCAF4L1Q3SXM0 396 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 HERC4Q5GLZ8 1057 aaPredicted RBP13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 PPP2R2DQ66LE6 453 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 ZPBP2Q6X784 338 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 ZNF720Q7Z2F6 126 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 ZNF598Q86UK7 904 aaKnown RBP13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 FSIP1Q8NA03 581 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 HVCN1Q96D96 273 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 LRCH3Q96II8 777 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 TGS1Q96RS0 853 aaKnown RBP13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 TRIM9Q9C026 710 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 TMEM117Q9H0C3 514 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 SEMA6BQ9H3T3 888 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 AAASQ9NRG9 546 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 OLFML3Q9NRN5 406 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 PANK4Q9NVE7 773 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 HOOK1Q9UJC3 728 aaKnown RBP13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 TNFSF13BQ9Y275 285 aa13.84□□□□□ -0.19
SHCBP1-204ENST00000565887 MYH11P35749 1972 aa13.83□□□□□ -0.19
SHCBP1-204ENST00000565887 FRMD3A2A2Y4 597 aa13.83□□□□□ -0.2
SHCBP1-204ENST00000565887 ZNF202O95125 648 aa13.83□□□□□ -0.2
SHCBP1-204ENST00000565887 RB1P06400 928 aa13.83□□□□□ -0.2
SHCBP1-204ENST00000565887 CA3P07451 260 aa13.83□□□□□ -0.2
SHCBP1-204ENST00000565887 ITGA4P13612 1032 aa13.83□□□□□ -0.2
SHCBP1-204ENST00000565887 NDUFA8P51970 172 aa13.83□□□□□ -0.2
SHCBP1-204ENST00000565887 GTF2BQ00403 316 aa13.83□□□□□ -0.2
SHCBP1-204ENST00000565887 KYAT1Q16773 422 aa13.83□□□□□ -0.2
SHCBP1-204ENST00000565887 ATF7IP2Q5U623 682 aa13.83□□□□□ -0.2
SHCBP1-204ENST00000565887 GLB1LQ6UWU2 654 aa13.83□□□□□ -0.2
SHCBP1-204ENST00000565887 CCDC47Q96A33 483 aaKnown RBP13.83□□□□□ -0.2
SHCBP1-204ENST00000565887 ACO2Q99798 780 aaKnown RBP13.83□□□□□ -0.2
SHCBP1-204ENST00000565887 MRPL9Q9BYD2 267 aaKnown RBP13.83□□□□□ -0.2
SHCBP1-204ENST00000565887 NKX2-4Q9H2Z4 354 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms